Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Gm18666-201ENSMUST00000190039 958 ntBASIC18.8■□□□□ 0.6
Cspg5Q71M36 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.8■□□□□ 0.6
Cspg5Q71M36 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cspg5Q71M36 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cspg5Q71M36 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cspg5Q71M36 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Cspg5Q71M36 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cspg5Q71M36 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cspg5Q71M36 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cspg5Q71M36 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cspg5Q71M36 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cspg5Q71M36 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cspg5Q71M36 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cspg5Q71M36 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cspg5Q71M36 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cspg5Q71M36 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cspg5Q71M36 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.79■□□□□ 0.6
Cspg5Q71M36 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.79■□□□□ 0.6
Cspg5Q71M36 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cspg5Q71M36 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cspg5Q71M36 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cspg5Q71M36 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Cspg5Q71M36 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cspg5Q71M36 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cspg5Q71M36 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cspg5Q71M36 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cspg5Q71M36 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cspg5Q71M36 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cspg5Q71M36 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cspg5Q71M36 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cspg5Q71M36 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Cspg5Q71M36 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cspg5Q71M36 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cspg5Q71M36 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.78■□□□□ 0.6
Cspg5Q71M36 Gm44549-201ENSMUST00000208351 577 ntBASIC18.78■□□□□ 0.6
Cspg5Q71M36 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cspg5Q71M36 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cspg5Q71M36 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cspg5Q71M36 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Cspg5Q71M36 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cspg5Q71M36 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cspg5Q71M36 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.78■□□□□ 0.6
Cspg5Q71M36 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cspg5Q71M36 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cspg5Q71M36 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cspg5Q71M36 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.77■□□□□ 0.6
Cspg5Q71M36 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.77■□□□□ 0.6
Cspg5Q71M36 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.77■□□□□ 0.6
Cspg5Q71M36 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cspg5Q71M36 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Cspg5Q71M36 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cspg5Q71M36 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cspg5Q71M36 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cspg5Q71M36 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Cspg5Q71M36 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cspg5Q71M36 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cspg5Q71M36 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.77■□□□□ 0.59
Cspg5Q71M36 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cspg5Q71M36 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cspg5Q71M36 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cspg5Q71M36 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Cspg5Q71M36 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cspg5Q71M36 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cspg5Q71M36 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cspg5Q71M36 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cspg5Q71M36 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cspg5Q71M36 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cspg5Q71M36 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cspg5Q71M36 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cspg5Q71M36 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.76■□□□□ 0.59
Cspg5Q71M36 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cspg5Q71M36 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cspg5Q71M36 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cspg5Q71M36 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cspg5Q71M36 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cspg5Q71M36 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cspg5Q71M36 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cspg5Q71M36 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cspg5Q71M36 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.75■□□□□ 0.59
Cspg5Q71M36 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cspg5Q71M36 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Cspg5Q71M36 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.75■□□□□ 0.59
Cspg5Q71M36 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cspg5Q71M36 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cspg5Q71M36 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cspg5Q71M36 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cspg5Q71M36 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cspg5Q71M36 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cspg5Q71M36 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cspg5Q71M36 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.74■□□□□ 0.59
Cspg5Q71M36 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cspg5Q71M36 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Cspg5Q71M36 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Cspg5Q71M36 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cspg5Q71M36 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cspg5Q71M36 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Cspg5Q71M36 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.74■□□□□ 0.59
Cspg5Q71M36 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.74■□□□□ 0.59
Cspg5Q71M36 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.74■□□□□ 0.59
Cspg5Q71M36 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms