Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Casc1Q6TDU8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Casc1Q6TDU8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Casc1Q6TDU8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Casc1Q6TDU8 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Casc1Q6TDU8 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Casc1Q6TDU8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Casc1Q6TDU8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Casc1Q6TDU8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Casc1Q6TDU8 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Casc1Q6TDU8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Casc1Q6TDU8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Casc1Q6TDU8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Casc1Q6TDU8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Casc1Q6TDU8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Casc1Q6TDU8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Casc1Q6TDU8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Casc1Q6TDU8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.69■■□□□ 1.06
Casc1Q6TDU8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Casc1Q6TDU8 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Casc1Q6TDU8 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Casc1Q6TDU8 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Casc1Q6TDU8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Casc1Q6TDU8 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.69■■□□□ 1.06
Casc1Q6TDU8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Casc1Q6TDU8 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
Casc1Q6TDU8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Casc1Q6TDU8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.68■■□□□ 1.06
Casc1Q6TDU8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Casc1Q6TDU8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Casc1Q6TDU8 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Casc1Q6TDU8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC21.68■■□□□ 1.06
Casc1Q6TDU8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Casc1Q6TDU8 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
Casc1Q6TDU8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Casc1Q6TDU8 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Casc1Q6TDU8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Casc1Q6TDU8 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Casc1Q6TDU8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Casc1Q6TDU8 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Casc1Q6TDU8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.67■■□□□ 1.06
Casc1Q6TDU8 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Casc1Q6TDU8 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Casc1Q6TDU8 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Casc1Q6TDU8 Gm15853-202ENSMUST00000195518 2041 ntBASIC21.67■■□□□ 1.06
Casc1Q6TDU8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Casc1Q6TDU8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Casc1Q6TDU8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Casc1Q6TDU8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Casc1Q6TDU8 Gm44832-201ENSMUST00000208849 2303 ntBASIC21.66■■□□□ 1.06
Casc1Q6TDU8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Casc1Q6TDU8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Casc1Q6TDU8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Casc1Q6TDU8 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Casc1Q6TDU8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Casc1Q6TDU8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Casc1Q6TDU8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Casc1Q6TDU8 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Casc1Q6TDU8 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Casc1Q6TDU8 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Casc1Q6TDU8 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Casc1Q6TDU8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Casc1Q6TDU8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Casc1Q6TDU8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Casc1Q6TDU8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Casc1Q6TDU8 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Casc1Q6TDU8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.65■■□□□ 1.06
Casc1Q6TDU8 Gm13534-201ENSMUST00000121169 513 ntBASIC21.65■■□□□ 1.06
Casc1Q6TDU8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Casc1Q6TDU8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.65■■□□□ 1.06
Casc1Q6TDU8 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Casc1Q6TDU8 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Casc1Q6TDU8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.65■■□□□ 1.06
Casc1Q6TDU8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
Casc1Q6TDU8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Casc1Q6TDU8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC21.65■■□□□ 1.06
Casc1Q6TDU8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Casc1Q6TDU8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC21.64■■□□□ 1.06
Casc1Q6TDU8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Casc1Q6TDU8 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Casc1Q6TDU8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Casc1Q6TDU8 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Casc1Q6TDU8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Casc1Q6TDU8 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.64■■□□□ 1.05
Casc1Q6TDU8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Casc1Q6TDU8 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Casc1Q6TDU8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Casc1Q6TDU8 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Casc1Q6TDU8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Casc1Q6TDU8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Casc1Q6TDU8 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Casc1Q6TDU8 Gm42900-201ENSMUST00000197184 2167 ntBASIC21.63■■□□□ 1.05
Casc1Q6TDU8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Casc1Q6TDU8 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.63■■□□□ 1.05
Casc1Q6TDU8 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Casc1Q6TDU8 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Casc1Q6TDU8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Casc1Q6TDU8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Casc1Q6TDU8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Casc1Q6TDU8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms