Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Chd4Q6PDQ2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Chd4Q6PDQ2 Gm37820-201ENSMUST00000194021 2147 ntBASIC23.96■■□□□ 1.43
Chd4Q6PDQ2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Chd4Q6PDQ2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Chd4Q6PDQ2 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Chd4Q6PDQ2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC23.96■■□□□ 1.43
Chd4Q6PDQ2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Chd4Q6PDQ2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
Chd4Q6PDQ2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC23.96■■□□□ 1.43
Chd4Q6PDQ2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.43
Chd4Q6PDQ2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC23.95■■□□□ 1.43
Chd4Q6PDQ2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Chd4Q6PDQ2 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Chd4Q6PDQ2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC23.95■■□□□ 1.42
Chd4Q6PDQ2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Chd4Q6PDQ2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Chd4Q6PDQ2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Chd4Q6PDQ2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Chd4Q6PDQ2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC23.94■■□□□ 1.42
Chd4Q6PDQ2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Chd4Q6PDQ2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC23.94■■□□□ 1.42
Chd4Q6PDQ2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Chd4Q6PDQ2 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Chd4Q6PDQ2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Chd4Q6PDQ2 Gm43213-201ENSMUST00000151866 1790 ntBASIC23.94■■□□□ 1.42
Chd4Q6PDQ2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Chd4Q6PDQ2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Chd4Q6PDQ2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC23.94■■□□□ 1.42
Chd4Q6PDQ2 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Chd4Q6PDQ2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Chd4Q6PDQ2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Chd4Q6PDQ2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
Chd4Q6PDQ2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
Chd4Q6PDQ2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Chd4Q6PDQ2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC23.93■■□□□ 1.42
Chd4Q6PDQ2 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC23.93■■□□□ 1.42
Chd4Q6PDQ2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Chd4Q6PDQ2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Chd4Q6PDQ2 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Chd4Q6PDQ2 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC23.92■■□□□ 1.42
Chd4Q6PDQ2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC23.92■■□□□ 1.42
Chd4Q6PDQ2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Chd4Q6PDQ2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Chd4Q6PDQ2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Chd4Q6PDQ2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC23.92■■□□□ 1.42
Chd4Q6PDQ2 BC021767-201ENSMUST00000126387 1716 ntBASIC23.92■■□□□ 1.42
Chd4Q6PDQ2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
Chd4Q6PDQ2 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Chd4Q6PDQ2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC23.92■■□□□ 1.42
Chd4Q6PDQ2 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Chd4Q6PDQ2 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Chd4Q6PDQ2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Chd4Q6PDQ2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC23.91■■□□□ 1.42
Chd4Q6PDQ2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Chd4Q6PDQ2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Chd4Q6PDQ2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Chd4Q6PDQ2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Chd4Q6PDQ2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC23.91■■□□□ 1.42
Chd4Q6PDQ2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Chd4Q6PDQ2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Chd4Q6PDQ2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Chd4Q6PDQ2 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Chd4Q6PDQ2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC23.9■■□□□ 1.42
Chd4Q6PDQ2 Gm18032-201ENSMUST00000222541 538 ntBASIC23.9■■□□□ 1.42
Chd4Q6PDQ2 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Chd4Q6PDQ2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
Chd4Q6PDQ2 Gm42922-201ENSMUST00000195887 2078 ntBASIC23.9■■□□□ 1.42
Chd4Q6PDQ2 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC23.9■■□□□ 1.42
Chd4Q6PDQ2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Chd4Q6PDQ2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC23.9■■□□□ 1.42
Chd4Q6PDQ2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Chd4Q6PDQ2 AC159205.6-201ENSMUST00000224935 887 ntBASIC23.9■■□□□ 1.42
Chd4Q6PDQ2 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Chd4Q6PDQ2 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Chd4Q6PDQ2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Chd4Q6PDQ2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Chd4Q6PDQ2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
Chd4Q6PDQ2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Chd4Q6PDQ2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Chd4Q6PDQ2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Chd4Q6PDQ2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Chd4Q6PDQ2 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC23.88■■□□□ 1.41
Chd4Q6PDQ2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Chd4Q6PDQ2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Chd4Q6PDQ2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC23.88■■□□□ 1.41
Chd4Q6PDQ2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC23.88■■□□□ 1.41
Chd4Q6PDQ2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Chd4Q6PDQ2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Chd4Q6PDQ2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC23.87■■□□□ 1.41
Chd4Q6PDQ2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Chd4Q6PDQ2 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Chd4Q6PDQ2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Chd4Q6PDQ2 Gm45906-201ENSMUST00000208911 1430 ntBASIC23.87■■□□□ 1.41
Chd4Q6PDQ2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Chd4Q6PDQ2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC23.87■■□□□ 1.41
Chd4Q6PDQ2 AC121961.1-201ENSMUST00000218594 1779 ntBASIC23.87■■□□□ 1.41
Chd4Q6PDQ2 Gm5784-201ENSMUST00000179344 2478 ntBASIC23.87■■□□□ 1.41
Chd4Q6PDQ2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Chd4Q6PDQ2 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC23.86■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms