Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac4Q6NZM9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac4Q6NZM9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Hdac4Q6NZM9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hdac4Q6NZM9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Hdac4Q6NZM9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Hdac4Q6NZM9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.37■□□□□ 0.85
Hdac4Q6NZM9 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.37■□□□□ 0.85
Hdac4Q6NZM9 Gm13148-201ENSMUST00000118892 745 ntBASIC20.37■□□□□ 0.85
Hdac4Q6NZM9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Hdac4Q6NZM9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hdac4Q6NZM9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hdac4Q6NZM9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hdac4Q6NZM9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Hdac4Q6NZM9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hdac4Q6NZM9 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.37■□□□□ 0.85
Hdac4Q6NZM9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hdac4Q6NZM9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hdac4Q6NZM9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hdac4Q6NZM9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Hdac4Q6NZM9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hdac4Q6NZM9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.36■□□□□ 0.85
Hdac4Q6NZM9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Hdac4Q6NZM9 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.36■□□□□ 0.85
Hdac4Q6NZM9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hdac4Q6NZM9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Hdac4Q6NZM9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hdac4Q6NZM9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Hdac4Q6NZM9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hdac4Q6NZM9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hdac4Q6NZM9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hdac4Q6NZM9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Hdac4Q6NZM9 Gm37179-201ENSMUST00000194862 823 ntBASIC20.35■□□□□ 0.85
Hdac4Q6NZM9 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.35■□□□□ 0.85
Hdac4Q6NZM9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hdac4Q6NZM9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hdac4Q6NZM9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Hdac4Q6NZM9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hdac4Q6NZM9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Hdac4Q6NZM9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Hdac4Q6NZM9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hdac4Q6NZM9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hdac4Q6NZM9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hdac4Q6NZM9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Hdac4Q6NZM9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hdac4Q6NZM9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hdac4Q6NZM9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hdac4Q6NZM9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hdac4Q6NZM9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hdac4Q6NZM9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hdac4Q6NZM9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.85
Hdac4Q6NZM9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hdac4Q6NZM9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Hdac4Q6NZM9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hdac4Q6NZM9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.33■□□□□ 0.85
Hdac4Q6NZM9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
Hdac4Q6NZM9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.33■□□□□ 0.85
Hdac4Q6NZM9 Gm26524-201ENSMUST00000192339 390 ntBASIC20.33■□□□□ 0.85
Hdac4Q6NZM9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hdac4Q6NZM9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hdac4Q6NZM9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hdac4Q6NZM9 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.33■□□□□ 0.84
Hdac4Q6NZM9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Hdac4Q6NZM9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hdac4Q6NZM9 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.32■□□□□ 0.84
Hdac4Q6NZM9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hdac4Q6NZM9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Hdac4Q6NZM9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.32■□□□□ 0.84
Hdac4Q6NZM9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hdac4Q6NZM9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hdac4Q6NZM9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hdac4Q6NZM9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Hdac4Q6NZM9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Hdac4Q6NZM9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hdac4Q6NZM9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hdac4Q6NZM9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Hdac4Q6NZM9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hdac4Q6NZM9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac4Q6NZM9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Hdac4Q6NZM9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac4Q6NZM9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Hdac4Q6NZM9 Mir5133-201ENSMUST00000174955 77 ntBASIC20.31■□□□□ 0.84
Hdac4Q6NZM9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.31■□□□□ 0.84
Hdac4Q6NZM9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.31■□□□□ 0.84
Hdac4Q6NZM9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac4Q6NZM9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac4Q6NZM9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac4Q6NZM9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac4Q6NZM9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac4Q6NZM9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hdac4Q6NZM9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hdac4Q6NZM9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hdac4Q6NZM9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Hdac4Q6NZM9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.3■□□□□ 0.84
Hdac4Q6NZM9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hdac4Q6NZM9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hdac4Q6NZM9 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Hdac4Q6NZM9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hdac4Q6NZM9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hdac4Q6NZM9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms