Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.44■□□□□ 0.54
Sp140Q6NSQ5 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sp140Q6NSQ5 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sp140Q6NSQ5 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.44■□□□□ 0.54
Sp140Q6NSQ5 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Sp140Q6NSQ5 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sp140Q6NSQ5 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sp140Q6NSQ5 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sp140Q6NSQ5 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Sp140Q6NSQ5 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Sp140Q6NSQ5 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sp140Q6NSQ5 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sp140Q6NSQ5 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.43■□□□□ 0.54
Sp140Q6NSQ5 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Sp140Q6NSQ5 Tgds-204ENSMUST00000228543 1594 ntBASIC18.43■□□□□ 0.54
Sp140Q6NSQ5 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sp140Q6NSQ5 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Sp140Q6NSQ5 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sp140Q6NSQ5 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sp140Q6NSQ5 Gm42569-201ENSMUST00000200539 472 ntBASIC18.43■□□□□ 0.54
Sp140Q6NSQ5 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.43■□□□□ 0.54
Sp140Q6NSQ5 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sp140Q6NSQ5 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sp140Q6NSQ5 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sp140Q6NSQ5 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sp140Q6NSQ5 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sp140Q6NSQ5 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sp140Q6NSQ5 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sp140Q6NSQ5 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sp140Q6NSQ5 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Sp140Q6NSQ5 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Sp140Q6NSQ5 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sp140Q6NSQ5 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.42■□□□□ 0.54
Sp140Q6NSQ5 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sp140Q6NSQ5 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sp140Q6NSQ5 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sp140Q6NSQ5 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sp140Q6NSQ5 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sp140Q6NSQ5 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sp140Q6NSQ5 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sp140Q6NSQ5 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.42■□□□□ 0.54
Sp140Q6NSQ5 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sp140Q6NSQ5 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sp140Q6NSQ5 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sp140Q6NSQ5 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sp140Q6NSQ5 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sp140Q6NSQ5 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sp140Q6NSQ5 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sp140Q6NSQ5 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sp140Q6NSQ5 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sp140Q6NSQ5 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Sp140Q6NSQ5 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.41■□□□□ 0.54
Sp140Q6NSQ5 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sp140Q6NSQ5 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Sp140Q6NSQ5 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sp140Q6NSQ5 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sp140Q6NSQ5 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sp140Q6NSQ5 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Sp140Q6NSQ5 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sp140Q6NSQ5 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sp140Q6NSQ5 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sp140Q6NSQ5 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sp140Q6NSQ5 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sp140Q6NSQ5 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sp140Q6NSQ5 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Sp140Q6NSQ5 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
Sp140Q6NSQ5 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sp140Q6NSQ5 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sp140Q6NSQ5 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Sp140Q6NSQ5 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.4■□□□□ 0.54
Sp140Q6NSQ5 Gm8495-201ENSMUST00000188740 694 ntBASIC18.4■□□□□ 0.54
Sp140Q6NSQ5 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.4■□□□□ 0.54
Sp140Q6NSQ5 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sp140Q6NSQ5 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Sp140Q6NSQ5 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sp140Q6NSQ5 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sp140Q6NSQ5 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.4■□□□□ 0.54
Sp140Q6NSQ5 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sp140Q6NSQ5 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.4■□□□□ 0.54
Sp140Q6NSQ5 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sp140Q6NSQ5 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.4■□□□□ 0.54
Sp140Q6NSQ5 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sp140Q6NSQ5 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
Sp140Q6NSQ5 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sp140Q6NSQ5 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.39■□□□□ 0.53
Sp140Q6NSQ5 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sp140Q6NSQ5 Gm22325-201ENSMUST00000158904 308 ntBASIC18.39■□□□□ 0.53
Sp140Q6NSQ5 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.39■□□□□ 0.53
Sp140Q6NSQ5 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.39■□□□□ 0.53
Sp140Q6NSQ5 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sp140Q6NSQ5 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Sp140Q6NSQ5 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sp140Q6NSQ5 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sp140Q6NSQ5 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.39■□□□□ 0.53
Sp140Q6NSQ5 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sp140Q6NSQ5 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Sp140Q6NSQ5 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Sp140Q6NSQ5 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sp140Q6NSQ5 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.38■□□□□ 0.53
Sp140Q6NSQ5 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms