Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retreg2Q6NS82 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.56■□□□□ 0.72
Retreg2Q6NS82 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Retreg2Q6NS82 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retreg2Q6NS82 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retreg2Q6NS82 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retreg2Q6NS82 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retreg2Q6NS82 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retreg2Q6NS82 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retreg2Q6NS82 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retreg2Q6NS82 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retreg2Q6NS82 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retreg2Q6NS82 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Retreg2Q6NS82 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.55■□□□□ 0.72
Retreg2Q6NS82 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.55■□□□□ 0.72
Retreg2Q6NS82 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Retreg2Q6NS82 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retreg2Q6NS82 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.55■□□□□ 0.72
Retreg2Q6NS82 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retreg2Q6NS82 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retreg2Q6NS82 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retreg2Q6NS82 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Retreg2Q6NS82 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retreg2Q6NS82 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.54■□□□□ 0.72
Retreg2Q6NS82 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retreg2Q6NS82 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retreg2Q6NS82 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retreg2Q6NS82 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Retreg2Q6NS82 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.54■□□□□ 0.72
Retreg2Q6NS82 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retreg2Q6NS82 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retreg2Q6NS82 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retreg2Q6NS82 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Retreg2Q6NS82 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retreg2Q6NS82 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retreg2Q6NS82 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Retreg2Q6NS82 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retreg2Q6NS82 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retreg2Q6NS82 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retreg2Q6NS82 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retreg2Q6NS82 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.53■□□□□ 0.72
Retreg2Q6NS82 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.53■□□□□ 0.72
Retreg2Q6NS82 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.53■□□□□ 0.72
Retreg2Q6NS82 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retreg2Q6NS82 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retreg2Q6NS82 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retreg2Q6NS82 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retreg2Q6NS82 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retreg2Q6NS82 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
Retreg2Q6NS82 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.52■□□□□ 0.72
Retreg2Q6NS82 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retreg2Q6NS82 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retreg2Q6NS82 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retreg2Q6NS82 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Retreg2Q6NS82 Rarb-207ENSMUST00000225921 2756 ntBASIC19.52■□□□□ 0.72
Retreg2Q6NS82 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Retreg2Q6NS82 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retreg2Q6NS82 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retreg2Q6NS82 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retreg2Q6NS82 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retreg2Q6NS82 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retreg2Q6NS82 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retreg2Q6NS82 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retreg2Q6NS82 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retreg2Q6NS82 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retreg2Q6NS82 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Retreg2Q6NS82 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.51■□□□□ 0.71
Retreg2Q6NS82 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.51■□□□□ 0.71
Retreg2Q6NS82 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retreg2Q6NS82 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retreg2Q6NS82 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Retreg2Q6NS82 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retreg2Q6NS82 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retreg2Q6NS82 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.51■□□□□ 0.71
Retreg2Q6NS82 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retreg2Q6NS82 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retreg2Q6NS82 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retreg2Q6NS82 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retreg2Q6NS82 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retreg2Q6NS82 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retreg2Q6NS82 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retreg2Q6NS82 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retreg2Q6NS82 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retreg2Q6NS82 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retreg2Q6NS82 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Retreg2Q6NS82 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.5■□□□□ 0.71
Retreg2Q6NS82 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Retreg2Q6NS82 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.5■□□□□ 0.71
Retreg2Q6NS82 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.5■□□□□ 0.71
Retreg2Q6NS82 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retreg2Q6NS82 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Retreg2Q6NS82 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retreg2Q6NS82 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.5■□□□□ 0.71
Retreg2Q6NS82 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retreg2Q6NS82 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.5■□□□□ 0.71
Retreg2Q6NS82 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retreg2Q6NS82 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retreg2Q6NS82 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retreg2Q6NS82 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retreg2Q6NS82 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms