Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Krt39Q6IFX4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Krt39Q6IFX4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Krt39Q6IFX4 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Krt39Q6IFX4 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Krt39Q6IFX4 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Krt39Q6IFX4 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Krt39Q6IFX4 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.1■□□□□ 0.81
Krt39Q6IFX4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Krt39Q6IFX4 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Krt39Q6IFX4 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
Krt39Q6IFX4 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.1■□□□□ 0.81
Krt39Q6IFX4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Krt39Q6IFX4 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Krt39Q6IFX4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Krt39Q6IFX4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Krt39Q6IFX4 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.1■□□□□ 0.81
Krt39Q6IFX4 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Krt39Q6IFX4 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Krt39Q6IFX4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.1■□□□□ 0.81
Krt39Q6IFX4 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Krt39Q6IFX4 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Krt39Q6IFX4 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Krt39Q6IFX4 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Krt39Q6IFX4 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Krt39Q6IFX4 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Krt39Q6IFX4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Krt39Q6IFX4 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Krt39Q6IFX4 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Krt39Q6IFX4 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.09■□□□□ 0.81
Krt39Q6IFX4 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Krt39Q6IFX4 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Krt39Q6IFX4 Gm9988-201ENSMUST00000069786 435 ntBASIC20.09■□□□□ 0.81
Krt39Q6IFX4 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Krt39Q6IFX4 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Krt39Q6IFX4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Krt39Q6IFX4 Tgds-204ENSMUST00000228543 1594 ntBASIC20.08■□□□□ 0.81
Krt39Q6IFX4 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Krt39Q6IFX4 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Krt39Q6IFX4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Krt39Q6IFX4 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Krt39Q6IFX4 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.08■□□□□ 0.8
Krt39Q6IFX4 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Krt39Q6IFX4 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Krt39Q6IFX4 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Krt39Q6IFX4 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Krt39Q6IFX4 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Krt39Q6IFX4 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Krt39Q6IFX4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Krt39Q6IFX4 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Krt39Q6IFX4 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Krt39Q6IFX4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.07■□□□□ 0.8
Krt39Q6IFX4 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.07■□□□□ 0.8
Krt39Q6IFX4 Gm13534-201ENSMUST00000121169 513 ntBASIC20.07■□□□□ 0.8
Krt39Q6IFX4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.07■□□□□ 0.8
Krt39Q6IFX4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Krt39Q6IFX4 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Krt39Q6IFX4 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Krt39Q6IFX4 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Krt39Q6IFX4 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Krt39Q6IFX4 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Krt39Q6IFX4 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Krt39Q6IFX4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Krt39Q6IFX4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Krt39Q6IFX4 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Krt39Q6IFX4 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Krt39Q6IFX4 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Krt39Q6IFX4 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Krt39Q6IFX4 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Krt39Q6IFX4 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Krt39Q6IFX4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Krt39Q6IFX4 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Krt39Q6IFX4 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.05■□□□□ 0.8
Krt39Q6IFX4 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Krt39Q6IFX4 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Krt39Q6IFX4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.05■□□□□ 0.8
Krt39Q6IFX4 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Krt39Q6IFX4 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Krt39Q6IFX4 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Krt39Q6IFX4 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Krt39Q6IFX4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Krt39Q6IFX4 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Krt39Q6IFX4 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Krt39Q6IFX4 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.04■□□□□ 0.8
Krt39Q6IFX4 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Krt39Q6IFX4 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.04■□□□□ 0.8
Krt39Q6IFX4 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.04■□□□□ 0.8
Krt39Q6IFX4 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Krt39Q6IFX4 Gm18284-201ENSMUST00000172604 624 ntBASIC20.04■□□□□ 0.8
Krt39Q6IFX4 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.04■□□□□ 0.8
Krt39Q6IFX4 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Krt39Q6IFX4 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Krt39Q6IFX4 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Krt39Q6IFX4 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Krt39Q6IFX4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Krt39Q6IFX4 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Krt39Q6IFX4 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Krt39Q6IFX4 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Krt39Q6IFX4 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Krt39Q6IFX4 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms