Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Krt42Q6IFX2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Krt42Q6IFX2 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.69■□□□□ 0.58
Krt42Q6IFX2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Krt42Q6IFX2 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Krt42Q6IFX2 Gm9959-201ENSMUST00000068277 390 ntBASIC18.69■□□□□ 0.58
Krt42Q6IFX2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Krt42Q6IFX2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Krt42Q6IFX2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Krt42Q6IFX2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.69■□□□□ 0.58
Krt42Q6IFX2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Krt42Q6IFX2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Krt42Q6IFX2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Krt42Q6IFX2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Krt42Q6IFX2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Krt42Q6IFX2 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Krt42Q6IFX2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Krt42Q6IFX2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Krt42Q6IFX2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Krt42Q6IFX2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Krt42Q6IFX2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.68■□□□□ 0.58
Krt42Q6IFX2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Krt42Q6IFX2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Krt42Q6IFX2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Krt42Q6IFX2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Krt42Q6IFX2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Krt42Q6IFX2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Krt42Q6IFX2 Gm8969-201ENSMUST00000199694 526 ntBASIC18.67■□□□□ 0.58
Krt42Q6IFX2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Krt42Q6IFX2 Golgb1-201ENSMUST00000023534 498 ntBASIC18.67■□□□□ 0.58
Krt42Q6IFX2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Krt42Q6IFX2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
Krt42Q6IFX2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Krt42Q6IFX2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Krt42Q6IFX2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Krt42Q6IFX2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Krt42Q6IFX2 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Krt42Q6IFX2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Krt42Q6IFX2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Krt42Q6IFX2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.66■□□□□ 0.58
Krt42Q6IFX2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.66■□□□□ 0.58
Krt42Q6IFX2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Krt42Q6IFX2 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.66■□□□□ 0.58
Krt42Q6IFX2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Krt42Q6IFX2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Krt42Q6IFX2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Krt42Q6IFX2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Krt42Q6IFX2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Krt42Q6IFX2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Krt42Q6IFX2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.65■□□□□ 0.58
Krt42Q6IFX2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt42Q6IFX2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt42Q6IFX2 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt42Q6IFX2 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt42Q6IFX2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt42Q6IFX2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt42Q6IFX2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt42Q6IFX2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Krt42Q6IFX2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.65■□□□□ 0.58
Krt42Q6IFX2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt42Q6IFX2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Krt42Q6IFX2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.65■□□□□ 0.58
Krt42Q6IFX2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt42Q6IFX2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt42Q6IFX2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Krt42Q6IFX2 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Krt42Q6IFX2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt42Q6IFX2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt42Q6IFX2 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.65■□□□□ 0.58
Krt42Q6IFX2 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Krt42Q6IFX2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Krt42Q6IFX2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Krt42Q6IFX2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Krt42Q6IFX2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Krt42Q6IFX2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
Krt42Q6IFX2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Krt42Q6IFX2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Krt42Q6IFX2 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.64■□□□□ 0.57
Krt42Q6IFX2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Krt42Q6IFX2 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Krt42Q6IFX2 Spcs1-204ENSMUST00000226782 949 ntBASIC18.64■□□□□ 0.57
Krt42Q6IFX2 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Krt42Q6IFX2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Krt42Q6IFX2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Krt42Q6IFX2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Krt42Q6IFX2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Krt42Q6IFX2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Krt42Q6IFX2 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.64■□□□□ 0.57
Krt42Q6IFX2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt42Q6IFX2 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt42Q6IFX2 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.63■□□□□ 0.57
Krt42Q6IFX2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Krt42Q6IFX2 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt42Q6IFX2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt42Q6IFX2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt42Q6IFX2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt42Q6IFX2 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.63■□□□□ 0.57
Krt42Q6IFX2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Krt42Q6IFX2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt42Q6IFX2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms