Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AtmQ62388 Zfp783-201ENSMUST00000095946 670 ntBASIC17.29■□□□□ 0.36
AtmQ62388 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AtmQ62388 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.29■□□□□ 0.36
AtmQ62388 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AtmQ62388 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AtmQ62388 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.29■□□□□ 0.36
AtmQ62388 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AtmQ62388 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AtmQ62388 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AtmQ62388 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AtmQ62388 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AtmQ62388 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.29■□□□□ 0.36
AtmQ62388 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AtmQ62388 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AtmQ62388 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AtmQ62388 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AtmQ62388 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AtmQ62388 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
AtmQ62388 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
AtmQ62388 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AtmQ62388 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AtmQ62388 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
AtmQ62388 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
AtmQ62388 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
AtmQ62388 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AtmQ62388 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
AtmQ62388 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AtmQ62388 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.28■□□□□ 0.36
AtmQ62388 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.28■□□□□ 0.36
AtmQ62388 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.28■□□□□ 0.36
AtmQ62388 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.28■□□□□ 0.36
AtmQ62388 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AtmQ62388 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.28■□□□□ 0.36
AtmQ62388 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.27■□□□□ 0.36
AtmQ62388 Gm27525-201ENSMUST00000184465 107 ntBASIC17.27■□□□□ 0.36
AtmQ62388 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
AtmQ62388 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AtmQ62388 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
AtmQ62388 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
AtmQ62388 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
AtmQ62388 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
AtmQ62388 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.27■□□□□ 0.35
AtmQ62388 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.27■□□□□ 0.35
AtmQ62388 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
AtmQ62388 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.27■□□□□ 0.35
AtmQ62388 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.27■□□□□ 0.35
AtmQ62388 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
AtmQ62388 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AtmQ62388 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AtmQ62388 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
AtmQ62388 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AtmQ62388 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AtmQ62388 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AtmQ62388 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AtmQ62388 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AtmQ62388 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.26■□□□□ 0.35
AtmQ62388 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AtmQ62388 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AtmQ62388 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AtmQ62388 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AtmQ62388 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.25■□□□□ 0.35
AtmQ62388 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.25■□□□□ 0.35
AtmQ62388 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AtmQ62388 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AtmQ62388 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
AtmQ62388 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.25■□□□□ 0.35
AtmQ62388 Gm12085-201ENSMUST00000119263 940 ntBASIC17.25■□□□□ 0.35
AtmQ62388 Gm6623-201ENSMUST00000173570 544 ntBASIC17.25■□□□□ 0.35
AtmQ62388 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AtmQ62388 Gm18115-201ENSMUST00000221209 621 ntBASIC17.25■□□□□ 0.35
AtmQ62388 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AtmQ62388 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AtmQ62388 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
AtmQ62388 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AtmQ62388 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AtmQ62388 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AtmQ62388 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.25■□□□□ 0.35
AtmQ62388 Gm25016-201ENSMUST00000158399 131 ntBASIC17.24■□□□□ 0.35
AtmQ62388 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.24■□□□□ 0.35
AtmQ62388 Mzt1-203ENSMUST00000227948 952 ntBASIC17.24■□□□□ 0.35
AtmQ62388 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.24■□□□□ 0.35
AtmQ62388 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AtmQ62388 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AtmQ62388 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AtmQ62388 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
AtmQ62388 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AtmQ62388 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
AtmQ62388 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.24■□□□□ 0.35
AtmQ62388 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AtmQ62388 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AtmQ62388 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
AtmQ62388 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
AtmQ62388 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
AtmQ62388 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
AtmQ62388 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AtmQ62388 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AtmQ62388 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AtmQ62388 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AtmQ62388 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms