Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn9aQ62205 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn9aQ62205 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Scn9aQ62205 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn9aQ62205 Gm10654-201ENSMUST00000098653 1633 ntBASIC21.63■■□□□ 1.05
Scn9aQ62205 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC21.63■■□□□ 1.05
Scn9aQ62205 Gm14859-201ENSMUST00000117752 357 ntBASIC21.63■■□□□ 1.05
Scn9aQ62205 Gm12085-201ENSMUST00000119263 940 ntBASIC21.63■■□□□ 1.05
Scn9aQ62205 Gm7284-201ENSMUST00000131667 944 ntBASIC21.63■■□□□ 1.05
Scn9aQ62205 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC21.63■■□□□ 1.05
Scn9aQ62205 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn9aQ62205 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn9aQ62205 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn9aQ62205 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Scn9aQ62205 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scn9aQ62205 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Scn9aQ62205 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scn9aQ62205 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scn9aQ62205 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Scn9aQ62205 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Scn9aQ62205 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Scn9aQ62205 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.61■■□□□ 1.05
Scn9aQ62205 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Scn9aQ62205 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC21.61■■□□□ 1.05
Scn9aQ62205 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.61■■□□□ 1.05
Scn9aQ62205 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scn9aQ62205 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scn9aQ62205 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scn9aQ62205 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scn9aQ62205 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Scn9aQ62205 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scn9aQ62205 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scn9aQ62205 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scn9aQ62205 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scn9aQ62205 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scn9aQ62205 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Scn9aQ62205 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scn9aQ62205 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.6■■□□□ 1.05
Scn9aQ62205 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Scn9aQ62205 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scn9aQ62205 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Scn9aQ62205 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scn9aQ62205 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Scn9aQ62205 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scn9aQ62205 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scn9aQ62205 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scn9aQ62205 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scn9aQ62205 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scn9aQ62205 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Scn9aQ62205 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Scn9aQ62205 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scn9aQ62205 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scn9aQ62205 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Scn9aQ62205 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Scn9aQ62205 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Scn9aQ62205 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Scn9aQ62205 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Scn9aQ62205 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Scn9aQ62205 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Scn9aQ62205 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
Scn9aQ62205 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Scn9aQ62205 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Scn9aQ62205 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Scn9aQ62205 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Scn9aQ62205 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scn9aQ62205 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC21.57■■□□□ 1.04
Scn9aQ62205 Gm38027-201ENSMUST00000192315 235 ntBASIC21.57■■□□□ 1.04
Scn9aQ62205 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scn9aQ62205 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scn9aQ62205 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
Scn9aQ62205 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Scn9aQ62205 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scn9aQ62205 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scn9aQ62205 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn9aQ62205 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn9aQ62205 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC21.56■■□□□ 1.04
Scn9aQ62205 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC21.56■■□□□ 1.04
Scn9aQ62205 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn9aQ62205 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Scn9aQ62205 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn9aQ62205 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn9aQ62205 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn9aQ62205 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn9aQ62205 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Scn9aQ62205 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn9aQ62205 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn9aQ62205 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn9aQ62205 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Scn9aQ62205 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC21.56■■□□□ 1.04
Scn9aQ62205 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn9aQ62205 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scn9aQ62205 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scn9aQ62205 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scn9aQ62205 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC21.55■■□□□ 1.04
Scn9aQ62205 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC21.55■■□□□ 1.04
Scn9aQ62205 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC21.55■■□□□ 1.04
Scn9aQ62205 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC21.55■■□□□ 1.04
Scn9aQ62205 Mir2861-201ENSMUST00000175539 82 ntBASIC21.55■■□□□ 1.04
Scn9aQ62205 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC21.55■■□□□ 1.04
Scn9aQ62205 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms