Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Gm12922-201ENSMUST00000120626 809 ntBASIC17.06■□□□□ 0.32
Sox17Q61473 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox17Q61473 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.06■□□□□ 0.32
Sox17Q61473 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox17Q61473 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox17Q61473 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sox17Q61473 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox17Q61473 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Sox17Q61473 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.06■□□□□ 0.32
Sox17Q61473 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox17Q61473 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox17Q61473 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sox17Q61473 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox17Q61473 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox17Q61473 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox17Q61473 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Sox17Q61473 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Sox17Q61473 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox17Q61473 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox17Q61473 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox17Q61473 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Sox17Q61473 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox17Q61473 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox17Q61473 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sox17Q61473 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox17Q61473 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sox17Q61473 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.05■□□□□ 0.32
Sox17Q61473 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox17Q61473 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sox17Q61473 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox17Q61473 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.04■□□□□ 0.32
Sox17Q61473 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox17Q61473 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Sox17Q61473 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox17Q61473 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox17Q61473 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Sox17Q61473 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox17Q61473 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox17Q61473 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox17Q61473 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.04■□□□□ 0.32
Sox17Q61473 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox17Q61473 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox17Q61473 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.04■□□□□ 0.32
Sox17Q61473 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Sox17Q61473 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox17Q61473 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.04■□□□□ 0.32
Sox17Q61473 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Sox17Q61473 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox17Q61473 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Sox17Q61473 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sox17Q61473 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox17Q61473 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sox17Q61473 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox17Q61473 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox17Q61473 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Sox17Q61473 Rps24-207ENSMUST00000224568 714 ntBASIC17.03■□□□□ 0.32
Sox17Q61473 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox17Q61473 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox17Q61473 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox17Q61473 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sox17Q61473 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox17Q61473 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Sox17Q61473 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Sox17Q61473 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.03■□□□□ 0.32
Sox17Q61473 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox17Q61473 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Sox17Q61473 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox17Q61473 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox17Q61473 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.03■□□□□ 0.32
Sox17Q61473 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox17Q61473 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox17Q61473 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox17Q61473 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Sox17Q61473 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Sox17Q61473 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.02■□□□□ 0.32
Sox17Q61473 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox17Q61473 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox17Q61473 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox17Q61473 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox17Q61473 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sox17Q61473 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox17Q61473 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox17Q61473 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.02■□□□□ 0.32
Sox17Q61473 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sox17Q61473 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox17Q61473 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox17Q61473 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox17Q61473 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.02■□□□□ 0.32
Sox17Q61473 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sox17Q61473 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.02■□□□□ 0.31
Sox17Q61473 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Sox17Q61473 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Sox17Q61473 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sox17Q61473 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Sox17Q61473 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.02■□□□□ 0.31
Sox17Q61473 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.02■□□□□ 0.31
Sox17Q61473 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sox17Q61473 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sox17Q61473 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox17Q61473 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms