Protein–RNA interactions for Protein: Q61080

Foxf1, Forkhead box protein F1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxf1Q61080 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Foxf1Q61080 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Foxf1Q61080 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Foxf1Q61080 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Foxf1Q61080 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Foxf1Q61080 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Foxf1Q61080 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.22■□□□□ 0.03
Foxf1Q61080 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxf1Q61080 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxf1Q61080 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxf1Q61080 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Foxf1Q61080 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxf1Q61080 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxf1Q61080 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.22■□□□□ 0.03
Foxf1Q61080 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.22■□□□□ 0.03
Foxf1Q61080 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.22■□□□□ 0.03
Foxf1Q61080 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxf1Q61080 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.22■□□□□ 0.03
Foxf1Q61080 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Foxf1Q61080 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Foxf1Q61080 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxf1Q61080 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxf1Q61080 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxf1Q61080 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxf1Q61080 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxf1Q61080 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Foxf1Q61080 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxf1Q61080 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxf1Q61080 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxf1Q61080 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Foxf1Q61080 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Foxf1Q61080 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.21■□□□□ 0.03
Foxf1Q61080 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Foxf1Q61080 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
Foxf1Q61080 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.21■□□□□ 0.03
Foxf1Q61080 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxf1Q61080 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Foxf1Q61080 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxf1Q61080 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.21■□□□□ 0.03
Foxf1Q61080 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Foxf1Q61080 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Foxf1Q61080 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Foxf1Q61080 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Foxf1Q61080 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.2■□□□□ 0.02
Foxf1Q61080 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Foxf1Q61080 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Foxf1Q61080 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.2■□□□□ 0.02
Foxf1Q61080 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Foxf1Q61080 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Foxf1Q61080 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Foxf1Q61080 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.2■□□□□ 0.02
Foxf1Q61080 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Foxf1Q61080 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Foxf1Q61080 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Foxf1Q61080 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Foxf1Q61080 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Foxf1Q61080 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Foxf1Q61080 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Foxf1Q61080 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Foxf1Q61080 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Foxf1Q61080 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Foxf1Q61080 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Foxf1Q61080 Gm7290-201ENSMUST00000104990 617 ntBASIC15.19■□□□□ 0.02
Foxf1Q61080 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Foxf1Q61080 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Foxf1Q61080 Gm12918-201ENSMUST00000120234 636 ntBASIC15.19■□□□□ 0.02
Foxf1Q61080 Gm15710-201ENSMUST00000121821 636 ntBASIC15.19■□□□□ 0.02
Foxf1Q61080 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Foxf1Q61080 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Foxf1Q61080 Gm5075-201ENSMUST00000196916 622 ntBASIC15.19■□□□□ 0.02
Foxf1Q61080 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.19■□□□□ 0.02
Foxf1Q61080 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Foxf1Q61080 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.19■□□□□ 0.02
Foxf1Q61080 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.19■□□□□ 0.02
Foxf1Q61080 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Foxf1Q61080 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Foxf1Q61080 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Foxf1Q61080 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Foxf1Q61080 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Foxf1Q61080 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Foxf1Q61080 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Foxf1Q61080 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Foxf1Q61080 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Foxf1Q61080 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Foxf1Q61080 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Foxf1Q61080 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.18■□□□□ 0.02
Foxf1Q61080 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Foxf1Q61080 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Foxf1Q61080 Gm7291-201ENSMUST00000199147 382 ntBASIC15.18■□□□□ 0.02
Foxf1Q61080 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.18■□□□□ 0.02
Foxf1Q61080 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Foxf1Q61080 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Foxf1Q61080 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Foxf1Q61080 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Foxf1Q61080 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Foxf1Q61080 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Foxf1Q61080 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Foxf1Q61080 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Foxf1Q61080 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Foxf1Q61080 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms