Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scarb1Q61009 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scarb1Q61009 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.32■□□□□ 0.04
Scarb1Q61009 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scarb1Q61009 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scarb1Q61009 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scarb1Q61009 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scarb1Q61009 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scarb1Q61009 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scarb1Q61009 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scarb1Q61009 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scarb1Q61009 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scarb1Q61009 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scarb1Q61009 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Scarb1Q61009 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC15.32■□□□□ 0.04
Scarb1Q61009 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.32■□□□□ 0.04
Scarb1Q61009 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scarb1Q61009 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scarb1Q61009 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Scarb1Q61009 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scarb1Q61009 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scarb1Q61009 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scarb1Q61009 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scarb1Q61009 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC15.31■□□□□ 0.04
Scarb1Q61009 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.31■□□□□ 0.04
Scarb1Q61009 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC15.31■□□□□ 0.04
Scarb1Q61009 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scarb1Q61009 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scarb1Q61009 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scarb1Q61009 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scarb1Q61009 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scarb1Q61009 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scarb1Q61009 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scarb1Q61009 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scarb1Q61009 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Scarb1Q61009 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Scarb1Q61009 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Scarb1Q61009 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scarb1Q61009 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Scarb1Q61009 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scarb1Q61009 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Scarb1Q61009 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scarb1Q61009 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scarb1Q61009 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scarb1Q61009 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Scarb1Q61009 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Scarb1Q61009 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scarb1Q61009 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scarb1Q61009 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC15.3■□□□□ 0.04
Scarb1Q61009 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scarb1Q61009 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scarb1Q61009 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scarb1Q61009 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scarb1Q61009 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
Scarb1Q61009 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Scarb1Q61009 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scarb1Q61009 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Scarb1Q61009 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scarb1Q61009 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scarb1Q61009 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Scarb1Q61009 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scarb1Q61009 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Scarb1Q61009 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scarb1Q61009 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scarb1Q61009 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scarb1Q61009 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scarb1Q61009 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scarb1Q61009 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scarb1Q61009 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Scarb1Q61009 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scarb1Q61009 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC15.29■□□□□ 0.04
Scarb1Q61009 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC15.29■□□□□ 0.04
Scarb1Q61009 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC15.29■□□□□ 0.04
Scarb1Q61009 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scarb1Q61009 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scarb1Q61009 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scarb1Q61009 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scarb1Q61009 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Scarb1Q61009 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scarb1Q61009 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.29■□□□□ 0.04
Scarb1Q61009 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scarb1Q61009 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scarb1Q61009 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scarb1Q61009 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scarb1Q61009 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scarb1Q61009 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scarb1Q61009 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scarb1Q61009 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scarb1Q61009 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scarb1Q61009 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scarb1Q61009 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scarb1Q61009 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Scarb1Q61009 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scarb1Q61009 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scarb1Q61009 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scarb1Q61009 Gm7860-201ENSMUST00000121190 879 ntBASIC15.28■□□□□ 0.04
Scarb1Q61009 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scarb1Q61009 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scarb1Q61009 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scarb1Q61009 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms