Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col12a1Q60847 Gm2274-201ENSMUST00000184539 609 ntBASIC18.12■□□□□ 0.49
Col12a1Q60847 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Col12a1Q60847 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col12a1Q60847 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col12a1Q60847 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Col12a1Q60847 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col12a1Q60847 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
Col12a1Q60847 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Col12a1Q60847 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Col12a1Q60847 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Col12a1Q60847 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Col12a1Q60847 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Col12a1Q60847 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Col12a1Q60847 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Col12a1Q60847 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Col12a1Q60847 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col12a1Q60847 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Col12a1Q60847 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col12a1Q60847 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col12a1Q60847 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.11■□□□□ 0.49
Col12a1Q60847 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col12a1Q60847 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col12a1Q60847 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col12a1Q60847 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col12a1Q60847 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Col12a1Q60847 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.1■□□□□ 0.49
Col12a1Q60847 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.1■□□□□ 0.49
Col12a1Q60847 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col12a1Q60847 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.1■□□□□ 0.49
Col12a1Q60847 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Col12a1Q60847 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col12a1Q60847 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col12a1Q60847 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col12a1Q60847 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col12a1Q60847 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Col12a1Q60847 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col12a1Q60847 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col12a1Q60847 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.09■□□□□ 0.49
Col12a1Q60847 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col12a1Q60847 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col12a1Q60847 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col12a1Q60847 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.08■□□□□ 0.49
Col12a1Q60847 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Col12a1Q60847 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Col12a1Q60847 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col12a1Q60847 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Col12a1Q60847 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col12a1Q60847 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Col12a1Q60847 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col12a1Q60847 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col12a1Q60847 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.07■□□□□ 0.48
Col12a1Q60847 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col12a1Q60847 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Col12a1Q60847 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Col12a1Q60847 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col12a1Q60847 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col12a1Q60847 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.07■□□□□ 0.48
Col12a1Q60847 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col12a1Q60847 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col12a1Q60847 Gm21559-201ENSMUST00000220638 855 ntBASIC18.07■□□□□ 0.48
Col12a1Q60847 Gm8587-201ENSMUST00000076538 843 ntBASIC18.07■□□□□ 0.48
Col12a1Q60847 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col12a1Q60847 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Col12a1Q60847 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.06■□□□□ 0.48
Col12a1Q60847 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col12a1Q60847 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col12a1Q60847 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Col12a1Q60847 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col12a1Q60847 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Col12a1Q60847 Gm9013-201ENSMUST00000132939 882 ntBASIC18.05■□□□□ 0.48
Col12a1Q60847 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col12a1Q60847 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.05■□□□□ 0.48
Col12a1Q60847 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col12a1Q60847 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Col12a1Q60847 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col12a1Q60847 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.05■□□□□ 0.48
Col12a1Q60847 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col12a1Q60847 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col12a1Q60847 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col12a1Q60847 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col12a1Q60847 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.05■□□□□ 0.48
Col12a1Q60847 Gm6623-201ENSMUST00000173570 544 ntBASIC18.05■□□□□ 0.48
Col12a1Q60847 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col12a1Q60847 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col12a1Q60847 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Col12a1Q60847 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col12a1Q60847 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col12a1Q60847 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col12a1Q60847 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col12a1Q60847 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.04■□□□□ 0.48
Col12a1Q60847 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Col12a1Q60847 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col12a1Q60847 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col12a1Q60847 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col12a1Q60847 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col12a1Q60847 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Col12a1Q60847 Gm18958-201ENSMUST00000174258 762 ntBASIC18.04■□□□□ 0.48
Col12a1Q60847 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.04■□□□□ 0.48
Col12a1Q60847 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms