Protein–RNA interactions for Protein: Q60846

Tnfrsf8, Tumor necrosis factor receptor superfamily member 8, mousemouse

Predictions only

Length 498 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf8Q60846 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf8Q60846 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.13■□□□□ 0.33
Tnfrsf8Q60846 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf8Q60846 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Tnfrsf8Q60846 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf8Q60846 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Tnfrsf8Q60846 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.12■□□□□ 0.33
Tnfrsf8Q60846 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf8Q60846 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf8Q60846 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.12■□□□□ 0.33
Tnfrsf8Q60846 Golph3-205ENSMUST00000228671 2842 ntBASIC17.12■□□□□ 0.33
Tnfrsf8Q60846 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Tnfrsf8Q60846 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf8Q60846 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.12■□□□□ 0.33
Tnfrsf8Q60846 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.12■□□□□ 0.33
Tnfrsf8Q60846 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf8Q60846 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.12■□□□□ 0.33
Tnfrsf8Q60846 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Tnfrsf8Q60846 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf8Q60846 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.12■□□□□ 0.33
Tnfrsf8Q60846 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf8Q60846 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.11■□□□□ 0.33
Tnfrsf8Q60846 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf8Q60846 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf8Q60846 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.11■□□□□ 0.33
Tnfrsf8Q60846 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.11■□□□□ 0.33
Tnfrsf8Q60846 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf8Q60846 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf8Q60846 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.11■□□□□ 0.33
Tnfrsf8Q60846 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf8Q60846 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf8Q60846 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.11■□□□□ 0.33
Tnfrsf8Q60846 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf8Q60846 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf8Q60846 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf8Q60846 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.1■□□□□ 0.33
Tnfrsf8Q60846 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.1■□□□□ 0.33
Tnfrsf8Q60846 Mtag2-201ENSMUST00000058665 714 ntBASIC17.1■□□□□ 0.33
Tnfrsf8Q60846 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf8Q60846 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf8Q60846 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf8Q60846 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf8Q60846 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf8Q60846 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.09■□□□□ 0.33
Tnfrsf8Q60846 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf8Q60846 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf8Q60846 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.09■□□□□ 0.33
Tnfrsf8Q60846 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf8Q60846 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.09■□□□□ 0.33
Tnfrsf8Q60846 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Tnfrsf8Q60846 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.09■□□□□ 0.33
Tnfrsf8Q60846 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.09■□□□□ 0.33
Tnfrsf8Q60846 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.09■□□□□ 0.33
Tnfrsf8Q60846 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf8Q60846 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.09■□□□□ 0.33
Tnfrsf8Q60846 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf8Q60846 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf8Q60846 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf8Q60846 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf8Q60846 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf8Q60846 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.09■□□□□ 0.33
Tnfrsf8Q60846 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf8Q60846 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.09■□□□□ 0.33
Tnfrsf8Q60846 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf8Q60846 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf8Q60846 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Tnfrsf8Q60846 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Tnfrsf8Q60846 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tnfrsf8Q60846 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tnfrsf8Q60846 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf8Q60846 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.08■□□□□ 0.32
Tnfrsf8Q60846 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf8Q60846 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf8Q60846 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.08■□□□□ 0.32
Tnfrsf8Q60846 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf8Q60846 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf8Q60846 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.07■□□□□ 0.32
Tnfrsf8Q60846 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Tnfrsf8Q60846 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Tnfrsf8Q60846 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf8Q60846 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf8Q60846 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.07■□□□□ 0.32
Tnfrsf8Q60846 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf8Q60846 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf8Q60846 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Tnfrsf8Q60846 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf8Q60846 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf8Q60846 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf8Q60846 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf8Q60846 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf8Q60846 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf8Q60846 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf8Q60846 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Tnfrsf8Q60846 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Tnfrsf8Q60846 Gm10138-203ENSMUST00000206952 366 ntBASIC17.06■□□□□ 0.32
Tnfrsf8Q60846 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.06■□□□□ 0.32
Tnfrsf8Q60846 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
Tnfrsf8Q60846 Gm10812-201ENSMUST00000099864 546 ntBASIC17.06■□□□□ 0.32
Tnfrsf8Q60846 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf8Q60846 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms