Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim38Q5SZ99 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Trim38Q5SZ99 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim38Q5SZ99 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim38Q5SZ99 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim38Q5SZ99 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim38Q5SZ99 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim38Q5SZ99 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.87■□□□□ 0.61
Trim38Q5SZ99 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim38Q5SZ99 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.87■□□□□ 0.61
Trim38Q5SZ99 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.87■□□□□ 0.61
Trim38Q5SZ99 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.87■□□□□ 0.61
Trim38Q5SZ99 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.87■□□□□ 0.61
Trim38Q5SZ99 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim38Q5SZ99 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim38Q5SZ99 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim38Q5SZ99 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim38Q5SZ99 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Trim38Q5SZ99 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim38Q5SZ99 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Trim38Q5SZ99 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim38Q5SZ99 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim38Q5SZ99 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim38Q5SZ99 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Trim38Q5SZ99 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim38Q5SZ99 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.86■□□□□ 0.61
Trim38Q5SZ99 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Trim38Q5SZ99 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.86■□□□□ 0.61
Trim38Q5SZ99 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.86■□□□□ 0.61
Trim38Q5SZ99 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim38Q5SZ99 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim38Q5SZ99 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim38Q5SZ99 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim38Q5SZ99 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Trim38Q5SZ99 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim38Q5SZ99 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim38Q5SZ99 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim38Q5SZ99 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim38Q5SZ99 Gm26571-201ENSMUST00000181399 666 ntBASIC18.85■□□□□ 0.61
Trim38Q5SZ99 Gm42569-201ENSMUST00000200539 472 ntBASIC18.85■□□□□ 0.61
Trim38Q5SZ99 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim38Q5SZ99 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim38Q5SZ99 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.85■□□□□ 0.61
Trim38Q5SZ99 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim38Q5SZ99 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim38Q5SZ99 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim38Q5SZ99 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim38Q5SZ99 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim38Q5SZ99 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim38Q5SZ99 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim38Q5SZ99 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Trim38Q5SZ99 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim38Q5SZ99 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim38Q5SZ99 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim38Q5SZ99 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim38Q5SZ99 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim38Q5SZ99 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim38Q5SZ99 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim38Q5SZ99 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim38Q5SZ99 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim38Q5SZ99 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trim38Q5SZ99 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim38Q5SZ99 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim38Q5SZ99 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim38Q5SZ99 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim38Q5SZ99 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Trim38Q5SZ99 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim38Q5SZ99 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Trim38Q5SZ99 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim38Q5SZ99 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim38Q5SZ99 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim38Q5SZ99 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim38Q5SZ99 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim38Q5SZ99 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.82■□□□□ 0.6
Trim38Q5SZ99 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.82■□□□□ 0.6
Trim38Q5SZ99 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.82■□□□□ 0.6
Trim38Q5SZ99 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim38Q5SZ99 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim38Q5SZ99 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.82■□□□□ 0.6
Trim38Q5SZ99 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim38Q5SZ99 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim38Q5SZ99 Grk6-206ENSMUST00000224995 2971 ntBASIC18.82■□□□□ 0.6
Trim38Q5SZ99 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim38Q5SZ99 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Trim38Q5SZ99 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim38Q5SZ99 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim38Q5SZ99 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim38Q5SZ99 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.82■□□□□ 0.6
Trim38Q5SZ99 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim38Q5SZ99 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim38Q5SZ99 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim38Q5SZ99 Tgds-204ENSMUST00000228543 1594 ntBASIC18.81■□□□□ 0.6
Trim38Q5SZ99 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim38Q5SZ99 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Trim38Q5SZ99 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim38Q5SZ99 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Trim38Q5SZ99 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim38Q5SZ99 Gm7290-201ENSMUST00000104990 617 ntBASIC18.81■□□□□ 0.6
Trim38Q5SZ99 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.81■□□□□ 0.6
Trim38Q5SZ99 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms