Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.88■■□□□ 1.09
Vps54Q5SPW0 Zfp783-201ENSMUST00000095946 670 ntBASIC21.88■■□□□ 1.09
Vps54Q5SPW0 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.88■■□□□ 1.09
Vps54Q5SPW0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vps54Q5SPW0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vps54Q5SPW0 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Vps54Q5SPW0 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.88■■□□□ 1.09
Vps54Q5SPW0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Vps54Q5SPW0 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps54Q5SPW0 Gm44544-201ENSMUST00000207052 1844 ntBASIC21.87■■□□□ 1.09
Vps54Q5SPW0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps54Q5SPW0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.87■■□□□ 1.09
Vps54Q5SPW0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps54Q5SPW0 Gm38345-201ENSMUST00000192635 1748 ntBASIC21.87■■□□□ 1.09
Vps54Q5SPW0 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps54Q5SPW0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps54Q5SPW0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC21.87■■□□□ 1.09
Vps54Q5SPW0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps54Q5SPW0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps54Q5SPW0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps54Q5SPW0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps54Q5SPW0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps54Q5SPW0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vps54Q5SPW0 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Vps54Q5SPW0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.86■■□□□ 1.09
Vps54Q5SPW0 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
Vps54Q5SPW0 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vps54Q5SPW0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Vps54Q5SPW0 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vps54Q5SPW0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vps54Q5SPW0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Vps54Q5SPW0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vps54Q5SPW0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Vps54Q5SPW0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vps54Q5SPW0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vps54Q5SPW0 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Vps54Q5SPW0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vps54Q5SPW0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vps54Q5SPW0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vps54Q5SPW0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vps54Q5SPW0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Vps54Q5SPW0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Vps54Q5SPW0 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vps54Q5SPW0 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Vps54Q5SPW0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vps54Q5SPW0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vps54Q5SPW0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
Vps54Q5SPW0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps54Q5SPW0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps54Q5SPW0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps54Q5SPW0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps54Q5SPW0 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps54Q5SPW0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Vps54Q5SPW0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps54Q5SPW0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps54Q5SPW0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps54Q5SPW0 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vps54Q5SPW0 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vps54Q5SPW0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Vps54Q5SPW0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vps54Q5SPW0 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
Vps54Q5SPW0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vps54Q5SPW0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Vps54Q5SPW0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Vps54Q5SPW0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Vps54Q5SPW0 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Vps54Q5SPW0 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vps54Q5SPW0 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vps54Q5SPW0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vps54Q5SPW0 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vps54Q5SPW0 Gm5643-201ENSMUST00000117081 966 ntBASIC21.82■■□□□ 1.08
Vps54Q5SPW0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vps54Q5SPW0 Gm38285-201ENSMUST00000192928 922 ntBASIC21.82■■□□□ 1.08
Vps54Q5SPW0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC21.82■■□□□ 1.08
Vps54Q5SPW0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Vps54Q5SPW0 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vps54Q5SPW0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vps54Q5SPW0 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vps54Q5SPW0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vps54Q5SPW0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.82■■□□□ 1.08
Vps54Q5SPW0 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.82■■□□□ 1.08
Vps54Q5SPW0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vps54Q5SPW0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Vps54Q5SPW0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vps54Q5SPW0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vps54Q5SPW0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vps54Q5SPW0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vps54Q5SPW0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.81■■□□□ 1.08
Vps54Q5SPW0 Gm8520-201ENSMUST00000186517 868 ntBASIC21.81■■□□□ 1.08
Vps54Q5SPW0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vps54Q5SPW0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vps54Q5SPW0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vps54Q5SPW0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.81■■□□□ 1.08
Vps54Q5SPW0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Vps54Q5SPW0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Vps54Q5SPW0 Gm22240-201ENSMUST00000175225 82 ntBASIC21.8■■□□□ 1.08
Vps54Q5SPW0 Alkbh1-212ENSMUST00000185301 408 ntBASIC21.8■■□□□ 1.08
Vps54Q5SPW0 Fst-202ENSMUST00000223640 2612 ntBASIC21.8■■□□□ 1.08
Vps54Q5SPW0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Vps54Q5SPW0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC21.79■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms