Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc88aQ5SNZ0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc88aQ5SNZ0 Gm7889-201ENSMUST00000185591 958 ntBASIC21.04■□□□□ 0.96
Ccdc88aQ5SNZ0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc88aQ5SNZ0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc88aQ5SNZ0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc88aQ5SNZ0 Gm30025-201ENSMUST00000218555 728 ntBASIC21.03■□□□□ 0.96
Ccdc88aQ5SNZ0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc88aQ5SNZ0 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.03■□□□□ 0.96
Ccdc88aQ5SNZ0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc88aQ5SNZ0 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.03■□□□□ 0.96
Ccdc88aQ5SNZ0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC21.03■□□□□ 0.96
Ccdc88aQ5SNZ0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC21.03■□□□□ 0.96
Ccdc88aQ5SNZ0 Arhgef4-208ENSMUST00000211073 171 ntBASIC21.03■□□□□ 0.96
Ccdc88aQ5SNZ0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
Ccdc88aQ5SNZ0 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc88aQ5SNZ0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Ccdc88aQ5SNZ0 Zfp783-201ENSMUST00000095946 670 ntBASIC21.03■□□□□ 0.96
Ccdc88aQ5SNZ0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc88aQ5SNZ0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc88aQ5SNZ0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc88aQ5SNZ0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC21.02■□□□□ 0.96
Ccdc88aQ5SNZ0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc88aQ5SNZ0 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc88aQ5SNZ0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ccdc88aQ5SNZ0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ccdc88aQ5SNZ0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Ccdc88aQ5SNZ0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC21.01■□□□□ 0.95
Ccdc88aQ5SNZ0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc88aQ5SNZ0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc88aQ5SNZ0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21■□□□□ 0.95
Ccdc88aQ5SNZ0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc88aQ5SNZ0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc88aQ5SNZ0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc88aQ5SNZ0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc88aQ5SNZ0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc88aQ5SNZ0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc88aQ5SNZ0 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc88aQ5SNZ0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC21■□□□□ 0.95
Ccdc88aQ5SNZ0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC21■□□□□ 0.95
Ccdc88aQ5SNZ0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc88aQ5SNZ0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Ccdc88aQ5SNZ0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc88aQ5SNZ0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21■□□□□ 0.95
Ccdc88aQ5SNZ0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ccdc88aQ5SNZ0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Ccdc88aQ5SNZ0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ccdc88aQ5SNZ0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc88aQ5SNZ0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc88aQ5SNZ0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Ccdc88aQ5SNZ0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc88aQ5SNZ0 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Ccdc88aQ5SNZ0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.99■□□□□ 0.95
Ccdc88aQ5SNZ0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc88aQ5SNZ0 Gm21814-202ENSMUST00000203277 873 ntBASIC20.98■□□□□ 0.95
Ccdc88aQ5SNZ0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc88aQ5SNZ0 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc88aQ5SNZ0 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc88aQ5SNZ0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc88aQ5SNZ0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc88aQ5SNZ0 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc88aQ5SNZ0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc88aQ5SNZ0 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc88aQ5SNZ0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc88aQ5SNZ0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.97■□□□□ 0.95
Ccdc88aQ5SNZ0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ccdc88aQ5SNZ0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc88aQ5SNZ0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Ccdc88aQ5SNZ0 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc88aQ5SNZ0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Ccdc88aQ5SNZ0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Ccdc88aQ5SNZ0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Ccdc88aQ5SNZ0 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc88aQ5SNZ0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Ccdc88aQ5SNZ0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc88aQ5SNZ0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc88aQ5SNZ0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc88aQ5SNZ0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc88aQ5SNZ0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.96■□□□□ 0.95
Ccdc88aQ5SNZ0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Ccdc88aQ5SNZ0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ccdc88aQ5SNZ0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc88aQ5SNZ0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc88aQ5SNZ0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Ccdc88aQ5SNZ0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc88aQ5SNZ0 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.96■□□□□ 0.95
Ccdc88aQ5SNZ0 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.96■□□□□ 0.95
Ccdc88aQ5SNZ0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Ccdc88aQ5SNZ0 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc88aQ5SNZ0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc88aQ5SNZ0 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc88aQ5SNZ0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc88aQ5SNZ0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc88aQ5SNZ0 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Ccdc88aQ5SNZ0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Ccdc88aQ5SNZ0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc88aQ5SNZ0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc88aQ5SNZ0 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc88aQ5SNZ0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
Ccdc88aQ5SNZ0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms