Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-2Q5R1I3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-2Q5R1I3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
Trav7-2Q5R1I3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav7-2Q5R1I3 Gm42778-201ENSMUST00000199644 553 ntBASIC13.53□□□□□ -0.24
Trav7-2Q5R1I3 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC13.53□□□□□ -0.24
Trav7-2Q5R1I3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-2Q5R1I3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-2Q5R1I3 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-2Q5R1I3 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-2Q5R1I3 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-2Q5R1I3 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-2Q5R1I3 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Trav7-2Q5R1I3 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-2Q5R1I3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-2Q5R1I3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-2Q5R1I3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav7-2Q5R1I3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav7-2Q5R1I3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav7-2Q5R1I3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav7-2Q5R1I3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Trav7-2Q5R1I3 Gm38205-201ENSMUST00000192243 258 ntBASIC13.52□□□□□ -0.25
Trav7-2Q5R1I3 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav7-2Q5R1I3 AC099934.2-201ENSMUST00000196389 70 ntBASIC13.52□□□□□ -0.25
Trav7-2Q5R1I3 AC156953.1-201ENSMUST00000196953 70 ntBASIC13.52□□□□□ -0.25
Trav7-2Q5R1I3 AC157822.2-201ENSMUST00000200291 70 ntBASIC13.52□□□□□ -0.25
Trav7-2Q5R1I3 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7-2Q5R1I3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7-2Q5R1I3 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC13.52□□□□□ -0.25
Trav7-2Q5R1I3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7-2Q5R1I3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7-2Q5R1I3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7-2Q5R1I3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7-2Q5R1I3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7-2Q5R1I3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trav7-2Q5R1I3 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7-2Q5R1I3 Gm37811-201ENSMUST00000192416 2601 ntBASIC13.52□□□□□ -0.25
Trav7-2Q5R1I3 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7-2Q5R1I3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trav7-2Q5R1I3 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7-2Q5R1I3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7-2Q5R1I3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7-2Q5R1I3 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7-2Q5R1I3 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Trav7-2Q5R1I3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7-2Q5R1I3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC13.51□□□□□ -0.25
Trav7-2Q5R1I3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7-2Q5R1I3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7-2Q5R1I3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7-2Q5R1I3 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7-2Q5R1I3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7-2Q5R1I3 Gm13234-201ENSMUST00000120010 747 ntBASIC13.51□□□□□ -0.25
Trav7-2Q5R1I3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7-2Q5R1I3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7-2Q5R1I3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav7-2Q5R1I3 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC13.51□□□□□ -0.25
Trav7-2Q5R1I3 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7-2Q5R1I3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav7-2Q5R1I3 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC13.51□□□□□ -0.25
Trav7-2Q5R1I3 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7-2Q5R1I3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7-2Q5R1I3 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7-2Q5R1I3 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7-2Q5R1I3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7-2Q5R1I3 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trav7-2Q5R1I3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7-2Q5R1I3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7-2Q5R1I3 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7-2Q5R1I3 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav7-2Q5R1I3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7-2Q5R1I3 Reep4-203ENSMUST00000226563 1444 ntBASIC13.5□□□□□ -0.25
Trav7-2Q5R1I3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7-2Q5R1I3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC13.5□□□□□ -0.25
Trav7-2Q5R1I3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7-2Q5R1I3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7-2Q5R1I3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Trav7-2Q5R1I3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav7-2Q5R1I3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Trav7-2Q5R1I3 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7-2Q5R1I3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7-2Q5R1I3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7-2Q5R1I3 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7-2Q5R1I3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7-2Q5R1I3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trav7-2Q5R1I3 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.5□□□□□ -0.25
Trav7-2Q5R1I3 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7-2Q5R1I3 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7-2Q5R1I3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7-2Q5R1I3 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.49□□□□□ -0.25
Trav7-2Q5R1I3 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav7-2Q5R1I3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav7-2Q5R1I3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC13.49□□□□□ -0.25
Trav7-2Q5R1I3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav7-2Q5R1I3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav7-2Q5R1I3 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav7-2Q5R1I3 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav7-2Q5R1I3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav7-2Q5R1I3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav7-2Q5R1I3 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav7-2Q5R1I3 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms