Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav6-3Q5R1E6 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.63□□□□□ -0.07
Trav6-3Q5R1E6 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Trav6-3Q5R1E6 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-3Q5R1E6 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav6-3Q5R1E6 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-3Q5R1E6 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-3Q5R1E6 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-3Q5R1E6 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-3Q5R1E6 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-3Q5R1E6 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-3Q5R1E6 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-3Q5R1E6 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-3Q5R1E6 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-3Q5R1E6 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-3Q5R1E6 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav6-3Q5R1E6 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-3Q5R1E6 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-3Q5R1E6 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-3Q5R1E6 Fst-202ENSMUST00000223640 2612 ntBASIC14.62□□□□□ -0.07
Trav6-3Q5R1E6 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.62□□□□□ -0.07
Trav6-3Q5R1E6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-3Q5R1E6 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-3Q5R1E6 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-3Q5R1E6 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-3Q5R1E6 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-3Q5R1E6 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-3Q5R1E6 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-3Q5R1E6 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav6-3Q5R1E6 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-3Q5R1E6 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav6-3Q5R1E6 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-3Q5R1E6 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-3Q5R1E6 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.61□□□□□ -0.07
Trav6-3Q5R1E6 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
Trav6-3Q5R1E6 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-3Q5R1E6 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav6-3Q5R1E6 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-3Q5R1E6 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-3Q5R1E6 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-3Q5R1E6 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-3Q5R1E6 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-3Q5R1E6 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav6-3Q5R1E6 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.61□□□□□ -0.07
Trav6-3Q5R1E6 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-3Q5R1E6 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-3Q5R1E6 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav6-3Q5R1E6 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav6-3Q5R1E6 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trav6-3Q5R1E6 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-3Q5R1E6 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.6□□□□□ -0.07
Trav6-3Q5R1E6 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-3Q5R1E6 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-3Q5R1E6 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-3Q5R1E6 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav6-3Q5R1E6 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-3Q5R1E6 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-3Q5R1E6 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-3Q5R1E6 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav6-3Q5R1E6 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav6-3Q5R1E6 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-3Q5R1E6 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-3Q5R1E6 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-3Q5R1E6 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Trav6-3Q5R1E6 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.59□□□□□ -0.07
Trav6-3Q5R1E6 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-3Q5R1E6 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.59□□□□□ -0.07
Trav6-3Q5R1E6 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-3Q5R1E6 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trav6-3Q5R1E6 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav6-3Q5R1E6 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-3Q5R1E6 Gm10129-202ENSMUST00000193100 1316 ntBASIC14.59□□□□□ -0.07
Trav6-3Q5R1E6 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-3Q5R1E6 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-3Q5R1E6 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-3Q5R1E6 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-3Q5R1E6 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Trav6-3Q5R1E6 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-3Q5R1E6 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-3Q5R1E6 Gm10655-201ENSMUST00000098658 1397 ntBASIC14.59□□□□□ -0.07
Trav6-3Q5R1E6 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6-3Q5R1E6 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6-3Q5R1E6 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6-3Q5R1E6 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Trav6-3Q5R1E6 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6-3Q5R1E6 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6-3Q5R1E6 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Trav6-3Q5R1E6 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-3Q5R1E6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-3Q5R1E6 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-3Q5R1E6 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav6-3Q5R1E6 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Trav6-3Q5R1E6 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC14.58□□□□□ -0.08
Trav6-3Q5R1E6 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav6-3Q5R1E6 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trav6-3Q5R1E6 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trav6-3Q5R1E6 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-3Q5R1E6 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-3Q5R1E6 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav6-3Q5R1E6 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms