Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf43Q5NCP0 Gm38285-201ENSMUST00000192928 922 ntBASIC18.53■□□□□ 0.56
Rnf43Q5NCP0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf43Q5NCP0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf43Q5NCP0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.53■□□□□ 0.56
Rnf43Q5NCP0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf43Q5NCP0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Rnf43Q5NCP0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf43Q5NCP0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Rnf43Q5NCP0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf43Q5NCP0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf43Q5NCP0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf43Q5NCP0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf43Q5NCP0 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
Rnf43Q5NCP0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Rnf43Q5NCP0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Rnf43Q5NCP0 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.52■□□□□ 0.56
Rnf43Q5NCP0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf43Q5NCP0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.52■□□□□ 0.56
Rnf43Q5NCP0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf43Q5NCP0 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.52■□□□□ 0.55
Rnf43Q5NCP0 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf43Q5NCP0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf43Q5NCP0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf43Q5NCP0 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf43Q5NCP0 Gm13559-201ENSMUST00000120476 863 ntBASIC18.51■□□□□ 0.55
Rnf43Q5NCP0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf43Q5NCP0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf43Q5NCP0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf43Q5NCP0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf43Q5NCP0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf43Q5NCP0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf43Q5NCP0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Rnf43Q5NCP0 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf43Q5NCP0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.5■□□□□ 0.55
Rnf43Q5NCP0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf43Q5NCP0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf43Q5NCP0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf43Q5NCP0 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.5■□□□□ 0.55
Rnf43Q5NCP0 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.5■□□□□ 0.55
Rnf43Q5NCP0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.5■□□□□ 0.55
Rnf43Q5NCP0 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf43Q5NCP0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf43Q5NCP0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf43Q5NCP0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Rnf43Q5NCP0 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf43Q5NCP0 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf43Q5NCP0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Rnf43Q5NCP0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf43Q5NCP0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
Rnf43Q5NCP0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf43Q5NCP0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf43Q5NCP0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf43Q5NCP0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.49■□□□□ 0.55
Rnf43Q5NCP0 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.49■□□□□ 0.55
Rnf43Q5NCP0 Gm37292-201ENSMUST00000192062 758 ntBASIC18.49■□□□□ 0.55
Rnf43Q5NCP0 Gm42545-201ENSMUST00000202755 922 ntBASIC18.49■□□□□ 0.55
Rnf43Q5NCP0 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.49■□□□□ 0.55
Rnf43Q5NCP0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf43Q5NCP0 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf43Q5NCP0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf43Q5NCP0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Rnf43Q5NCP0 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf43Q5NCP0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf43Q5NCP0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf43Q5NCP0 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf43Q5NCP0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf43Q5NCP0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf43Q5NCP0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf43Q5NCP0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf43Q5NCP0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf43Q5NCP0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf43Q5NCP0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf43Q5NCP0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf43Q5NCP0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Rnf43Q5NCP0 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.48■□□□□ 0.55
Rnf43Q5NCP0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.48■□□□□ 0.55
Rnf43Q5NCP0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf43Q5NCP0 Timm23-208ENSMUST00000226683 750 ntBASIC18.48■□□□□ 0.55
Rnf43Q5NCP0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Rnf43Q5NCP0 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf43Q5NCP0 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf43Q5NCP0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Rnf43Q5NCP0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf43Q5NCP0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Rnf43Q5NCP0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf43Q5NCP0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.47■□□□□ 0.55
Rnf43Q5NCP0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf43Q5NCP0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf43Q5NCP0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf43Q5NCP0 Gm3375-201ENSMUST00000203929 796 ntBASIC18.47■□□□□ 0.55
Rnf43Q5NCP0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf43Q5NCP0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.47■□□□□ 0.55
Rnf43Q5NCP0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf43Q5NCP0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf43Q5NCP0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rnf43Q5NCP0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf43Q5NCP0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rnf43Q5NCP0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf43Q5NCP0 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms