Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Trim41Q5NCC3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC31.64■■■□□ 2.66
Trim41Q5NCC3 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC31.64■■■□□ 2.65
Trim41Q5NCC3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
Trim41Q5NCC3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Trim41Q5NCC3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
Trim41Q5NCC3 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Trim41Q5NCC3 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Trim41Q5NCC3 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC31.63■■■□□ 2.65
Trim41Q5NCC3 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Trim41Q5NCC3 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Trim41Q5NCC3 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Trim41Q5NCC3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
Trim41Q5NCC3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Trim41Q5NCC3 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC31.62■■■□□ 2.65
Trim41Q5NCC3 AA414768-201ENSMUST00000121924 1257 ntBASIC31.62■■■□□ 2.65
Trim41Q5NCC3 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
Trim41Q5NCC3 Gm45560-201ENSMUST00000211492 1472 ntBASIC31.62■■■□□ 2.65
Trim41Q5NCC3 Gm18025-201ENSMUST00000221733 862 ntBASIC31.62■■■□□ 2.65
Trim41Q5NCC3 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Trim41Q5NCC3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC31.62■■■□□ 2.65
Trim41Q5NCC3 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC31.62■■■□□ 2.65
Trim41Q5NCC3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Trim41Q5NCC3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC31.61■■■□□ 2.65
Trim41Q5NCC3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Trim41Q5NCC3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Trim41Q5NCC3 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Trim41Q5NCC3 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC31.61■■■□□ 2.65
Trim41Q5NCC3 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Trim41Q5NCC3 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Trim41Q5NCC3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Trim41Q5NCC3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Trim41Q5NCC3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Trim41Q5NCC3 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Trim41Q5NCC3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
Trim41Q5NCC3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC31.6■■■□□ 2.65
Trim41Q5NCC3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC31.6■■■□□ 2.65
Trim41Q5NCC3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Trim41Q5NCC3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Trim41Q5NCC3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Trim41Q5NCC3 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC31.6■■■□□ 2.65
Trim41Q5NCC3 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Trim41Q5NCC3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC31.6■■■□□ 2.65
Trim41Q5NCC3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC31.59■■■□□ 2.65
Trim41Q5NCC3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC31.59■■■□□ 2.65
Trim41Q5NCC3 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC31.59■■■□□ 2.65
Trim41Q5NCC3 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Trim41Q5NCC3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
Trim41Q5NCC3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC31.59■■■□□ 2.65
Trim41Q5NCC3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC31.59■■■□□ 2.65
Trim41Q5NCC3 Gm11539-201ENSMUST00000119837 557 ntBASIC31.59■■■□□ 2.65
Trim41Q5NCC3 Gm13436-201ENSMUST00000120418 567 ntBASIC31.59■■■□□ 2.65
Trim41Q5NCC3 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Trim41Q5NCC3 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Trim41Q5NCC3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Trim41Q5NCC3 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC31.58■■■□□ 2.65
Trim41Q5NCC3 Hsf1-204ENSMUST00000226872 2104 ntBASIC31.58■■■□□ 2.65
Trim41Q5NCC3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Trim41Q5NCC3 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
Trim41Q5NCC3 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Trim41Q5NCC3 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Trim41Q5NCC3 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC31.58■■■□□ 2.65
Trim41Q5NCC3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Trim41Q5NCC3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Trim41Q5NCC3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
Trim41Q5NCC3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Trim41Q5NCC3 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Trim41Q5NCC3 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Trim41Q5NCC3 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC31.57■■■□□ 2.64
Trim41Q5NCC3 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC31.57■■■□□ 2.64
Trim41Q5NCC3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC31.57■■■□□ 2.64
Trim41Q5NCC3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
Trim41Q5NCC3 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Trim41Q5NCC3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC31.56■■■□□ 2.64
Trim41Q5NCC3 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Trim41Q5NCC3 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Trim41Q5NCC3 Gm42545-201ENSMUST00000202755 922 ntBASIC31.56■■■□□ 2.64
Trim41Q5NCC3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC31.56■■■□□ 2.64
Trim41Q5NCC3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC31.56■■■□□ 2.64
Trim41Q5NCC3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Trim41Q5NCC3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Trim41Q5NCC3 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
Trim41Q5NCC3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC31.55■■■□□ 2.64
Trim41Q5NCC3 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Trim41Q5NCC3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
Trim41Q5NCC3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
Trim41Q5NCC3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC31.55■■■□□ 2.64
Trim41Q5NCC3 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Trim41Q5NCC3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC31.54■■■□□ 2.64
Trim41Q5NCC3 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Trim41Q5NCC3 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC31.54■■■□□ 2.64
Trim41Q5NCC3 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Trim41Q5NCC3 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Trim41Q5NCC3 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC31.54■■■□□ 2.64
Trim41Q5NCC3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC31.54■■■□□ 2.64
Trim41Q5NCC3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Trim41Q5NCC3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
Trim41Q5NCC3 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Trim41Q5NCC3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Trim41Q5NCC3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms