Protein–RNA interactions for Protein: Q52KR3

Prune2, Protein prune homolog 2, mousemouse

Predictions only

Length 3,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prune2Q52KR3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prune2Q52KR3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prune2Q52KR3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prune2Q52KR3 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.1■□□□□ 0.33
Prune2Q52KR3 Gm27463-201ENSMUST00000183569 57 ntBASIC17.1■□□□□ 0.33
Prune2Q52KR3 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.1■□□□□ 0.33
Prune2Q52KR3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prune2Q52KR3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prune2Q52KR3 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Prune2Q52KR3 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Prune2Q52KR3 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prune2Q52KR3 Mzt1-203ENSMUST00000227948 952 ntBASIC17.1■□□□□ 0.33
Prune2Q52KR3 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prune2Q52KR3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prune2Q52KR3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prune2Q52KR3 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.09■□□□□ 0.33
Prune2Q52KR3 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.09■□□□□ 0.33
Prune2Q52KR3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prune2Q52KR3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prune2Q52KR3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prune2Q52KR3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prune2Q52KR3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Prune2Q52KR3 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Prune2Q52KR3 Gm38027-201ENSMUST00000192315 235 ntBASIC17.09■□□□□ 0.33
Prune2Q52KR3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Prune2Q52KR3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prune2Q52KR3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Prune2Q52KR3 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.08■□□□□ 0.33
Prune2Q52KR3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prune2Q52KR3 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prune2Q52KR3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Prune2Q52KR3 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Prune2Q52KR3 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prune2Q52KR3 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Prune2Q52KR3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.08■□□□□ 0.32
Prune2Q52KR3 Mir6349-201ENSMUST00000184059 97 ntBASIC17.08■□□□□ 0.32
Prune2Q52KR3 Gm34391-201ENSMUST00000203706 907 ntBASIC17.08■□□□□ 0.32
Prune2Q52KR3 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prune2Q52KR3 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prune2Q52KR3 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prune2Q52KR3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Prune2Q52KR3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.07■□□□□ 0.32
Prune2Q52KR3 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prune2Q52KR3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prune2Q52KR3 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Prune2Q52KR3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Prune2Q52KR3 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Prune2Q52KR3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prune2Q52KR3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Prune2Q52KR3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Prune2Q52KR3 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.07■□□□□ 0.32
Prune2Q52KR3 Gm24589-201ENSMUST00000116692 94 ntBASIC17.07■□□□□ 0.32
Prune2Q52KR3 Gm2274-201ENSMUST00000184539 609 ntBASIC17.07■□□□□ 0.32
Prune2Q52KR3 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Prune2Q52KR3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prune2Q52KR3 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.07■□□□□ 0.32
Prune2Q52KR3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prune2Q52KR3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.06■□□□□ 0.32
Prune2Q52KR3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Prune2Q52KR3 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prune2Q52KR3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.06■□□□□ 0.32
Prune2Q52KR3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prune2Q52KR3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Prune2Q52KR3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Prune2Q52KR3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Prune2Q52KR3 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Prune2Q52KR3 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Prune2Q52KR3 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prune2Q52KR3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prune2Q52KR3 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Prune2Q52KR3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Prune2Q52KR3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prune2Q52KR3 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Prune2Q52KR3 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.05■□□□□ 0.32
Prune2Q52KR3 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prune2Q52KR3 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prune2Q52KR3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prune2Q52KR3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prune2Q52KR3 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prune2Q52KR3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prune2Q52KR3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prune2Q52KR3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Prune2Q52KR3 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Prune2Q52KR3 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prune2Q52KR3 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Prune2Q52KR3 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Prune2Q52KR3 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Prune2Q52KR3 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.04■□□□□ 0.32
Prune2Q52KR3 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Prune2Q52KR3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Prune2Q52KR3 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.04■□□□□ 0.32
Prune2Q52KR3 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.04■□□□□ 0.32
Prune2Q52KR3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prune2Q52KR3 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prune2Q52KR3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prune2Q52KR3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prune2Q52KR3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prune2Q52KR3 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.03■□□□□ 0.32
Prune2Q52KR3 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.03■□□□□ 0.32
Prune2Q52KR3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms