Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Herc2Q4U2R1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Herc2Q4U2R1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Herc2Q4U2R1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC10.95□□□□□ -0.66
Herc2Q4U2R1 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Herc2Q4U2R1 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Herc2Q4U2R1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Herc2Q4U2R1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Herc2Q4U2R1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Herc2Q4U2R1 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Herc2Q4U2R1 Gm5264-201ENSMUST00000190584 848 ntBASIC10.95□□□□□ -0.66
Herc2Q4U2R1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Herc2Q4U2R1 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Herc2Q4U2R1 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC10.95□□□□□ -0.66
Herc2Q4U2R1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC10.95□□□□□ -0.66
Herc2Q4U2R1 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Herc2Q4U2R1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Herc2Q4U2R1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Herc2Q4U2R1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Herc2Q4U2R1 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Herc2Q4U2R1 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Herc2Q4U2R1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Herc2Q4U2R1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Herc2Q4U2R1 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC10.94□□□□□ -0.66
Herc2Q4U2R1 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Herc2Q4U2R1 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC10.94□□□□□ -0.66
Herc2Q4U2R1 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Herc2Q4U2R1 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Herc2Q4U2R1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Herc2Q4U2R1 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Herc2Q4U2R1 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Herc2Q4U2R1 Gm10052-201ENSMUST00000168019 960 ntBASIC10.94□□□□□ -0.66
Herc2Q4U2R1 AC153889.1-201ENSMUST00000219257 330 ntBASIC10.94□□□□□ -0.66
Herc2Q4U2R1 Gm7729-201ENSMUST00000050143 801 ntBASIC10.94□□□□□ -0.66
Herc2Q4U2R1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Herc2Q4U2R1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Herc2Q4U2R1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Herc2Q4U2R1 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Herc2Q4U2R1 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Herc2Q4U2R1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Herc2Q4U2R1 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Herc2Q4U2R1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Herc2Q4U2R1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Herc2Q4U2R1 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Herc2Q4U2R1 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Herc2Q4U2R1 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Herc2Q4U2R1 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Herc2Q4U2R1 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Herc2Q4U2R1 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC10.93□□□□□ -0.66
Herc2Q4U2R1 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC10.93□□□□□ -0.66
Herc2Q4U2R1 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Herc2Q4U2R1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Herc2Q4U2R1 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Herc2Q4U2R1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Herc2Q4U2R1 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC10.93□□□□□ -0.66
Herc2Q4U2R1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Herc2Q4U2R1 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Herc2Q4U2R1 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Herc2Q4U2R1 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Herc2Q4U2R1 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Herc2Q4U2R1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Herc2Q4U2R1 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Herc2Q4U2R1 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC10.92□□□□□ -0.66
Herc2Q4U2R1 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC10.92□□□□□ -0.66
Herc2Q4U2R1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Herc2Q4U2R1 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Herc2Q4U2R1 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC10.92□□□□□ -0.66
Herc2Q4U2R1 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC10.92□□□□□ -0.66
Herc2Q4U2R1 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC10.92□□□□□ -0.66
Herc2Q4U2R1 Gm5364-201ENSMUST00000216789 889 ntBASIC10.92□□□□□ -0.66
Herc2Q4U2R1 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC10.92□□□□□ -0.66
Herc2Q4U2R1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Herc2Q4U2R1 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC10.92□□□□□ -0.66
Herc2Q4U2R1 Gm12350-201ENSMUST00000121208 462 ntBASIC10.92□□□□□ -0.66
Herc2Q4U2R1 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Herc2Q4U2R1 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Herc2Q4U2R1 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Herc2Q4U2R1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Herc2Q4U2R1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Herc2Q4U2R1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Herc2Q4U2R1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Herc2Q4U2R1 Ighv6-1-201ENSMUST00000193612 343 ntBASIC10.91□□□□□ -0.66
Herc2Q4U2R1 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Herc2Q4U2R1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Herc2Q4U2R1 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Herc2Q4U2R1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Herc2Q4U2R1 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Herc2Q4U2R1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC10.91□□□□□ -0.66
Herc2Q4U2R1 Mir5131-201ENSMUST00000175426 93 ntBASIC10.91□□□□□ -0.66
Herc2Q4U2R1 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Herc2Q4U2R1 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Herc2Q4U2R1 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Herc2Q4U2R1 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Herc2Q4U2R1 Rps4l-201ENSMUST00000071745 943 ntBASIC10.91□□□□□ -0.66
Herc2Q4U2R1 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Herc2Q4U2R1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Herc2Q4U2R1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Herc2Q4U2R1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Herc2Q4U2R1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Herc2Q4U2R1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms