Protein–RNA interactions for Protein: Q3V2L0

Defb28, Beta-defensin, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb28Q3V2L0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Defb28Q3V2L0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Defb28Q3V2L0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Defb28Q3V2L0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Defb28Q3V2L0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Defb28Q3V2L0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.56■□□□□ 0.4
Defb28Q3V2L0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Defb28Q3V2L0 Gm17661-201ENSMUST00000170317 270 ntBASIC17.56■□□□□ 0.4
Defb28Q3V2L0 Gm17971-201ENSMUST00000190239 806 ntBASIC17.56■□□□□ 0.4
Defb28Q3V2L0 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Defb28Q3V2L0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.56■□□□□ 0.4
Defb28Q3V2L0 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Defb28Q3V2L0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Defb28Q3V2L0 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.56■□□□□ 0.4
Defb28Q3V2L0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Defb28Q3V2L0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Defb28Q3V2L0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Defb28Q3V2L0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Defb28Q3V2L0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Defb28Q3V2L0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Defb28Q3V2L0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Defb28Q3V2L0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.55■□□□□ 0.4
Defb28Q3V2L0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Defb28Q3V2L0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Defb28Q3V2L0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Defb28Q3V2L0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Defb28Q3V2L0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Defb28Q3V2L0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Defb28Q3V2L0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Defb28Q3V2L0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Defb28Q3V2L0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Defb28Q3V2L0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Defb28Q3V2L0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Defb28Q3V2L0 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Defb28Q3V2L0 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.54■□□□□ 0.4
Defb28Q3V2L0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Defb28Q3V2L0 Gm7461-201ENSMUST00000058918 827 ntBASIC17.54■□□□□ 0.4
Defb28Q3V2L0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.54■□□□□ 0.4
Defb28Q3V2L0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Defb28Q3V2L0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Defb28Q3V2L0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Defb28Q3V2L0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.54■□□□□ 0.4
Defb28Q3V2L0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Defb28Q3V2L0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Defb28Q3V2L0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Defb28Q3V2L0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Defb28Q3V2L0 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Defb28Q3V2L0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Defb28Q3V2L0 Gm38027-201ENSMUST00000192315 235 ntBASIC17.53■□□□□ 0.4
Defb28Q3V2L0 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Defb28Q3V2L0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Defb28Q3V2L0 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.53■□□□□ 0.4
Defb28Q3V2L0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Defb28Q3V2L0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.53■□□□□ 0.4
Defb28Q3V2L0 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Defb28Q3V2L0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Defb28Q3V2L0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Defb28Q3V2L0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Defb28Q3V2L0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.52■□□□□ 0.4
Defb28Q3V2L0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Defb28Q3V2L0 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Defb28Q3V2L0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Defb28Q3V2L0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Defb28Q3V2L0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Defb28Q3V2L0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Defb28Q3V2L0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Defb28Q3V2L0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Defb28Q3V2L0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.51■□□□□ 0.39
Defb28Q3V2L0 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Defb28Q3V2L0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.51■□□□□ 0.39
Defb28Q3V2L0 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Defb28Q3V2L0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Defb28Q3V2L0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Defb28Q3V2L0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Defb28Q3V2L0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Defb28Q3V2L0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Defb28Q3V2L0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Defb28Q3V2L0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Defb28Q3V2L0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Defb28Q3V2L0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.5■□□□□ 0.39
Defb28Q3V2L0 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Defb28Q3V2L0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Defb28Q3V2L0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
Defb28Q3V2L0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Defb28Q3V2L0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Defb28Q3V2L0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.5■□□□□ 0.39
Defb28Q3V2L0 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Defb28Q3V2L0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Defb28Q3V2L0 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Defb28Q3V2L0 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Defb28Q3V2L0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Defb28Q3V2L0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Defb28Q3V2L0 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.49■□□□□ 0.39
Defb28Q3V2L0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Defb28Q3V2L0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.49■□□□□ 0.39
Defb28Q3V2L0 Gm27704-201ENSMUST00000185094 107 ntBASIC17.49■□□□□ 0.39
Defb28Q3V2L0 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.49■□□□□ 0.39
Defb28Q3V2L0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Defb28Q3V2L0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Defb28Q3V2L0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms