Protein–RNA interactions for Protein: Q3V079

Bbof1, Basal body-orientation factor 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bbof1Q3V079 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Bbof1Q3V079 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Bbof1Q3V079 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Bbof1Q3V079 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Bbof1Q3V079 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Bbof1Q3V079 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Bbof1Q3V079 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Bbof1Q3V079 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.91■□□□□ 0.78
Bbof1Q3V079 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Bbof1Q3V079 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.91■□□□□ 0.78
Bbof1Q3V079 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Bbof1Q3V079 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Bbof1Q3V079 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Bbof1Q3V079 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Bbof1Q3V079 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Bbof1Q3V079 Gm12933-201ENSMUST00000120203 872 ntBASIC19.91■□□□□ 0.78
Bbof1Q3V079 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.91■□□□□ 0.78
Bbof1Q3V079 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Bbof1Q3V079 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Bbof1Q3V079 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Bbof1Q3V079 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Bbof1Q3V079 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Bbof1Q3V079 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Bbof1Q3V079 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Bbof1Q3V079 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Bbof1Q3V079 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Bbof1Q3V079 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Bbof1Q3V079 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Bbof1Q3V079 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Bbof1Q3V079 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Bbof1Q3V079 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Bbof1Q3V079 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Bbof1Q3V079 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Bbof1Q3V079 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.9■□□□□ 0.78
Bbof1Q3V079 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.9■□□□□ 0.78
Bbof1Q3V079 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.9■□□□□ 0.78
Bbof1Q3V079 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
Bbof1Q3V079 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Bbof1Q3V079 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.9■□□□□ 0.78
Bbof1Q3V079 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Bbof1Q3V079 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Bbof1Q3V079 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Bbof1Q3V079 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.9■□□□□ 0.78
Bbof1Q3V079 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Bbof1Q3V079 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Bbof1Q3V079 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.9■□□□□ 0.78
Bbof1Q3V079 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Bbof1Q3V079 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Bbof1Q3V079 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Bbof1Q3V079 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Bbof1Q3V079 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Bbof1Q3V079 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Bbof1Q3V079 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.89■□□□□ 0.77
Bbof1Q3V079 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Bbof1Q3V079 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Bbof1Q3V079 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Bbof1Q3V079 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.89■□□□□ 0.77
Bbof1Q3V079 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Bbof1Q3V079 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.89■□□□□ 0.77
Bbof1Q3V079 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Bbof1Q3V079 Gm10602-201ENSMUST00000098239 609 ntBASIC19.89■□□□□ 0.77
Bbof1Q3V079 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Bbof1Q3V079 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Bbof1Q3V079 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Bbof1Q3V079 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.88■□□□□ 0.77
Bbof1Q3V079 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Bbof1Q3V079 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Bbof1Q3V079 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Bbof1Q3V079 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Bbof1Q3V079 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.88■□□□□ 0.77
Bbof1Q3V079 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Bbof1Q3V079 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Bbof1Q3V079 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Bbof1Q3V079 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Bbof1Q3V079 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.88■□□□□ 0.77
Bbof1Q3V079 Gm6365-201ENSMUST00000054711 744 ntBASIC19.88■□□□□ 0.77
Bbof1Q3V079 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Bbof1Q3V079 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Bbof1Q3V079 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Bbof1Q3V079 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Bbof1Q3V079 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Bbof1Q3V079 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Bbof1Q3V079 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Bbof1Q3V079 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Bbof1Q3V079 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Bbof1Q3V079 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.87■□□□□ 0.77
Bbof1Q3V079 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Bbof1Q3V079 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Bbof1Q3V079 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Bbof1Q3V079 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.87■□□□□ 0.77
Bbof1Q3V079 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Bbof1Q3V079 Gm7290-201ENSMUST00000104990 617 ntBASIC19.87■□□□□ 0.77
Bbof1Q3V079 Gm12918-201ENSMUST00000120234 636 ntBASIC19.87■□□□□ 0.77
Bbof1Q3V079 Gm15710-201ENSMUST00000121821 636 ntBASIC19.87■□□□□ 0.77
Bbof1Q3V079 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
Bbof1Q3V079 Mir5133-201ENSMUST00000174955 77 ntBASIC19.87■□□□□ 0.77
Bbof1Q3V079 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.87■□□□□ 0.77
Bbof1Q3V079 Gm5075-201ENSMUST00000196916 622 ntBASIC19.87■□□□□ 0.77
Bbof1Q3V079 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.87■□□□□ 0.77
Bbof1Q3V079 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms