Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.7■□□□□ 0.1
Shisa3Q3UPR0 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shisa3Q3UPR0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shisa3Q3UPR0 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Shisa3Q3UPR0 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shisa3Q3UPR0 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Shisa3Q3UPR0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Shisa3Q3UPR0 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shisa3Q3UPR0 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.7■□□□□ 0.1
Shisa3Q3UPR0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shisa3Q3UPR0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Shisa3Q3UPR0 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa3Q3UPR0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa3Q3UPR0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa3Q3UPR0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa3Q3UPR0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.69■□□□□ 0.1
Shisa3Q3UPR0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa3Q3UPR0 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa3Q3UPR0 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa3Q3UPR0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa3Q3UPR0 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
Shisa3Q3UPR0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC15.69■□□□□ 0.1
Shisa3Q3UPR0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa3Q3UPR0 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa3Q3UPR0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa3Q3UPR0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa3Q3UPR0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa3Q3UPR0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa3Q3UPR0 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.68■□□□□ 0.1
Shisa3Q3UPR0 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.68■□□□□ 0.1
Shisa3Q3UPR0 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa3Q3UPR0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa3Q3UPR0 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Shisa3Q3UPR0 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
Shisa3Q3UPR0 Gm11421-201ENSMUST00000122124 294 ntBASIC15.68■□□□□ 0.1
Shisa3Q3UPR0 Gm43060-201ENSMUST00000200621 289 ntBASIC15.68■□□□□ 0.1
Shisa3Q3UPR0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa3Q3UPR0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa3Q3UPR0 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa3Q3UPR0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa3Q3UPR0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Shisa3Q3UPR0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Shisa3Q3UPR0 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Shisa3Q3UPR0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Shisa3Q3UPR0 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa3Q3UPR0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa3Q3UPR0 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shisa3Q3UPR0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.67■□□□□ 0.1
Shisa3Q3UPR0 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Shisa3Q3UPR0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Shisa3Q3UPR0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shisa3Q3UPR0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shisa3Q3UPR0 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Shisa3Q3UPR0 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shisa3Q3UPR0 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shisa3Q3UPR0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Shisa3Q3UPR0 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.66■□□□□ 0.1
Shisa3Q3UPR0 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shisa3Q3UPR0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Shisa3Q3UPR0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Shisa3Q3UPR0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shisa3Q3UPR0 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shisa3Q3UPR0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Shisa3Q3UPR0 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shisa3Q3UPR0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Shisa3Q3UPR0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Shisa3Q3UPR0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shisa3Q3UPR0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shisa3Q3UPR0 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shisa3Q3UPR0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.65■□□□□ 0.1
Shisa3Q3UPR0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shisa3Q3UPR0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shisa3Q3UPR0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Shisa3Q3UPR0 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Shisa3Q3UPR0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shisa3Q3UPR0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Shisa3Q3UPR0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Shisa3Q3UPR0 Gm7860-201ENSMUST00000121190 879 ntBASIC15.65■□□□□ 0.1
Shisa3Q3UPR0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shisa3Q3UPR0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Shisa3Q3UPR0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shisa3Q3UPR0 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shisa3Q3UPR0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Shisa3Q3UPR0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shisa3Q3UPR0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Shisa3Q3UPR0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa3Q3UPR0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Shisa3Q3UPR0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa3Q3UPR0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa3Q3UPR0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa3Q3UPR0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa3Q3UPR0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa3Q3UPR0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa3Q3UPR0 AC137127.1-201ENSMUST00000213466 1078 ntBASIC15.64■□□□□ 0.09
Shisa3Q3UPR0 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa3Q3UPR0 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa3Q3UPR0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa3Q3UPR0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Shisa3Q3UPR0 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa3Q3UPR0 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms