Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nlrc4Q3UP24 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Nlrc4Q3UP24 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nlrc4Q3UP24 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nlrc4Q3UP24 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Nlrc4Q3UP24 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.16■□□□□ 0.66
Nlrc4Q3UP24 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nlrc4Q3UP24 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nlrc4Q3UP24 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nlrc4Q3UP24 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nlrc4Q3UP24 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nlrc4Q3UP24 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nlrc4Q3UP24 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nlrc4Q3UP24 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nlrc4Q3UP24 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.16■□□□□ 0.66
Nlrc4Q3UP24 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nlrc4Q3UP24 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nlrc4Q3UP24 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Nlrc4Q3UP24 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nlrc4Q3UP24 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Nlrc4Q3UP24 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.15■□□□□ 0.66
Nlrc4Q3UP24 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nlrc4Q3UP24 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nlrc4Q3UP24 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nlrc4Q3UP24 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nlrc4Q3UP24 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.15■□□□□ 0.66
Nlrc4Q3UP24 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nlrc4Q3UP24 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Nlrc4Q3UP24 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nlrc4Q3UP24 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nlrc4Q3UP24 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nlrc4Q3UP24 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nlrc4Q3UP24 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nlrc4Q3UP24 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nlrc4Q3UP24 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nlrc4Q3UP24 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nlrc4Q3UP24 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nlrc4Q3UP24 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.14■□□□□ 0.66
Nlrc4Q3UP24 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nlrc4Q3UP24 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nlrc4Q3UP24 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nlrc4Q3UP24 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.14■□□□□ 0.65
Nlrc4Q3UP24 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nlrc4Q3UP24 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.13■□□□□ 0.65
Nlrc4Q3UP24 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nlrc4Q3UP24 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nlrc4Q3UP24 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nlrc4Q3UP24 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nlrc4Q3UP24 Gm11249-201ENSMUST00000117071 859 ntBASIC19.13■□□□□ 0.65
Nlrc4Q3UP24 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.13■□□□□ 0.65
Nlrc4Q3UP24 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nlrc4Q3UP24 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.13■□□□□ 0.65
Nlrc4Q3UP24 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nlrc4Q3UP24 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nlrc4Q3UP24 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nlrc4Q3UP24 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Nlrc4Q3UP24 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Nlrc4Q3UP24 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nlrc4Q3UP24 Gm11927-201ENSMUST00000118472 759 ntBASIC19.12■□□□□ 0.65
Nlrc4Q3UP24 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.12■□□□□ 0.65
Nlrc4Q3UP24 Zfp783-201ENSMUST00000095946 670 ntBASIC19.12■□□□□ 0.65
Nlrc4Q3UP24 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nlrc4Q3UP24 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nlrc4Q3UP24 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nlrc4Q3UP24 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nlrc4Q3UP24 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.11■□□□□ 0.65
Nlrc4Q3UP24 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Nlrc4Q3UP24 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nlrc4Q3UP24 Flg-201ENSMUST00000050758 1488 ntBASIC19.11■□□□□ 0.65
Nlrc4Q3UP24 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nlrc4Q3UP24 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Nlrc4Q3UP24 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nlrc4Q3UP24 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nlrc4Q3UP24 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Nlrc4Q3UP24 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nlrc4Q3UP24 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Nlrc4Q3UP24 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nlrc4Q3UP24 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Nlrc4Q3UP24 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nlrc4Q3UP24 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nlrc4Q3UP24 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nlrc4Q3UP24 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nlrc4Q3UP24 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nlrc4Q3UP24 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nlrc4Q3UP24 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Nlrc4Q3UP24 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nlrc4Q3UP24 Trmt13-210ENSMUST00000198454 880 ntBASIC19.1■□□□□ 0.65
Nlrc4Q3UP24 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nlrc4Q3UP24 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nlrc4Q3UP24 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Nlrc4Q3UP24 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nlrc4Q3UP24 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.09■□□□□ 0.65
Nlrc4Q3UP24 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nlrc4Q3UP24 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nlrc4Q3UP24 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nlrc4Q3UP24 Gm38285-201ENSMUST00000192928 922 ntBASIC19.09■□□□□ 0.65
Nlrc4Q3UP24 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.09■□□□□ 0.65
Nlrc4Q3UP24 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nlrc4Q3UP24 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nlrc4Q3UP24 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms