Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Limch1Q3UH68 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Limch1Q3UH68 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Limch1Q3UH68 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Limch1Q3UH68 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Limch1Q3UH68 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.39■■□□□ 1.02
Limch1Q3UH68 Grk6-206ENSMUST00000224995 2971 ntBASIC21.39■■□□□ 1.02
Limch1Q3UH68 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Limch1Q3UH68 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Limch1Q3UH68 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Limch1Q3UH68 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Limch1Q3UH68 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Limch1Q3UH68 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC21.39■■□□□ 1.02
Limch1Q3UH68 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Limch1Q3UH68 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Limch1Q3UH68 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Limch1Q3UH68 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Limch1Q3UH68 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.39■■□□□ 1.01
Limch1Q3UH68 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Limch1Q3UH68 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Limch1Q3UH68 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Limch1Q3UH68 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Limch1Q3UH68 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Limch1Q3UH68 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC21.39■■□□□ 1.01
Limch1Q3UH68 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Limch1Q3UH68 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Limch1Q3UH68 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Limch1Q3UH68 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Limch1Q3UH68 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Limch1Q3UH68 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Limch1Q3UH68 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Limch1Q3UH68 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Limch1Q3UH68 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Limch1Q3UH68 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC21.38■■□□□ 1.01
Limch1Q3UH68 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.38■■□□□ 1.01
Limch1Q3UH68 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Limch1Q3UH68 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC21.37■■□□□ 1.01
Limch1Q3UH68 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC21.37■■□□□ 1.01
Limch1Q3UH68 AC107452.1-201ENSMUST00000227963 481 ntBASIC21.37■■□□□ 1.01
Limch1Q3UH68 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Limch1Q3UH68 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Limch1Q3UH68 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
Limch1Q3UH68 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Limch1Q3UH68 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Limch1Q3UH68 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.36■■□□□ 1.01
Limch1Q3UH68 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Limch1Q3UH68 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Limch1Q3UH68 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC21.36■■□□□ 1.01
Limch1Q3UH68 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Limch1Q3UH68 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Limch1Q3UH68 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Limch1Q3UH68 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Limch1Q3UH68 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Limch1Q3UH68 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Limch1Q3UH68 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Limch1Q3UH68 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Limch1Q3UH68 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.36■■□□□ 1.01
Limch1Q3UH68 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
Limch1Q3UH68 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Limch1Q3UH68 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Limch1Q3UH68 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Limch1Q3UH68 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Limch1Q3UH68 Gm13168-201ENSMUST00000121771 632 ntBASIC21.35■■□□□ 1.01
Limch1Q3UH68 Gm10252-201ENSMUST00000209541 832 ntBASIC21.35■■□□□ 1.01
Limch1Q3UH68 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Limch1Q3UH68 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.35■■□□□ 1.01
Limch1Q3UH68 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Limch1Q3UH68 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC21.35■■□□□ 1.01
Limch1Q3UH68 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Limch1Q3UH68 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Limch1Q3UH68 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.34■■□□□ 1.01
Limch1Q3UH68 AC122769.4-201ENSMUST00000228166 901 ntBASIC21.34■■□□□ 1.01
Limch1Q3UH68 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Limch1Q3UH68 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Limch1Q3UH68 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Limch1Q3UH68 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Limch1Q3UH68 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC21.33■■□□□ 1.01
Limch1Q3UH68 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Limch1Q3UH68 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Limch1Q3UH68 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.33■■□□□ 1.01
Limch1Q3UH68 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Limch1Q3UH68 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Limch1Q3UH68 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Limch1Q3UH68 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Limch1Q3UH68 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Limch1Q3UH68 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Limch1Q3UH68 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Limch1Q3UH68 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.33■■□□□ 1.01
Limch1Q3UH68 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Limch1Q3UH68 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.33■■□□□ 1.01
Limch1Q3UH68 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.33■■□□□ 1.01
Limch1Q3UH68 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Limch1Q3UH68 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.33■■□□□ 1.01
Limch1Q3UH68 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC21.33■■□□□ 1.01
Limch1Q3UH68 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Limch1Q3UH68 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.33■■□□□ 1.01
Limch1Q3UH68 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Limch1Q3UH68 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Limch1Q3UH68 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Limch1Q3UH68 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms