Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col19a1Q0VF58 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.5■□□□□ 0.71
Col19a1Q0VF58 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.5■□□□□ 0.71
Col19a1Q0VF58 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.5■□□□□ 0.71
Col19a1Q0VF58 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col19a1Q0VF58 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col19a1Q0VF58 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col19a1Q0VF58 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.5■□□□□ 0.71
Col19a1Q0VF58 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col19a1Q0VF58 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
Col19a1Q0VF58 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col19a1Q0VF58 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Col19a1Q0VF58 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
Col19a1Q0VF58 Mir2861-201ENSMUST00000175539 82 ntBASIC19.49■□□□□ 0.71
Col19a1Q0VF58 Gm6443-201ENSMUST00000203599 874 ntBASIC19.49■□□□□ 0.71
Col19a1Q0VF58 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Col19a1Q0VF58 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Col19a1Q0VF58 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col19a1Q0VF58 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col19a1Q0VF58 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col19a1Q0VF58 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col19a1Q0VF58 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.48■□□□□ 0.71
Col19a1Q0VF58 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col19a1Q0VF58 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col19a1Q0VF58 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col19a1Q0VF58 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col19a1Q0VF58 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col19a1Q0VF58 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col19a1Q0VF58 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col19a1Q0VF58 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col19a1Q0VF58 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col19a1Q0VF58 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col19a1Q0VF58 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col19a1Q0VF58 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col19a1Q0VF58 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col19a1Q0VF58 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col19a1Q0VF58 Gm18958-201ENSMUST00000174258 762 ntBASIC19.47■□□□□ 0.71
Col19a1Q0VF58 Gm27389-201ENSMUST00000183622 195 ntBASIC19.47■□□□□ 0.71
Col19a1Q0VF58 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col19a1Q0VF58 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Col19a1Q0VF58 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col19a1Q0VF58 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col19a1Q0VF58 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col19a1Q0VF58 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Col19a1Q0VF58 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col19a1Q0VF58 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col19a1Q0VF58 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Col19a1Q0VF58 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.46■□□□□ 0.71
Col19a1Q0VF58 Gm9013-201ENSMUST00000132939 882 ntBASIC19.46■□□□□ 0.71
Col19a1Q0VF58 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.46■□□□□ 0.71
Col19a1Q0VF58 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col19a1Q0VF58 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col19a1Q0VF58 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col19a1Q0VF58 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Col19a1Q0VF58 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.7
Col19a1Q0VF58 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col19a1Q0VF58 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col19a1Q0VF58 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col19a1Q0VF58 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col19a1Q0VF58 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col19a1Q0VF58 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col19a1Q0VF58 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col19a1Q0VF58 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.45■□□□□ 0.7
Col19a1Q0VF58 Mir3081-201ENSMUST00000175305 84 ntBASIC19.45■□□□□ 0.7
Col19a1Q0VF58 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Col19a1Q0VF58 AW822252-206ENSMUST00000208904 237 ntBASIC19.45■□□□□ 0.7
Col19a1Q0VF58 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col19a1Q0VF58 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col19a1Q0VF58 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col19a1Q0VF58 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col19a1Q0VF58 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Col19a1Q0VF58 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.44■□□□□ 0.7
Col19a1Q0VF58 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
Col19a1Q0VF58 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.44■□□□□ 0.7
Col19a1Q0VF58 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Col19a1Q0VF58 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.44■□□□□ 0.7
Col19a1Q0VF58 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col19a1Q0VF58 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC19.44■□□□□ 0.7
Col19a1Q0VF58 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col19a1Q0VF58 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col19a1Q0VF58 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col19a1Q0VF58 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Col19a1Q0VF58 Gm7370-201ENSMUST00000219471 767 ntBASIC19.44■□□□□ 0.7
Col19a1Q0VF58 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col19a1Q0VF58 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.44■□□□□ 0.7
Col19a1Q0VF58 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col19a1Q0VF58 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col19a1Q0VF58 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col19a1Q0VF58 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Col19a1Q0VF58 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col19a1Q0VF58 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col19a1Q0VF58 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col19a1Q0VF58 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col19a1Q0VF58 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col19a1Q0VF58 Gm18115-201ENSMUST00000221209 621 ntBASIC19.43■□□□□ 0.7
Col19a1Q0VF58 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Col19a1Q0VF58 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Col19a1Q0VF58 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col19a1Q0VF58 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col19a1Q0VF58 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms