Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col9a2Q07643 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col9a2Q07643 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col9a2Q07643 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.82■□□□□ 0.76
Col9a2Q07643 Gm43183-201ENSMUST00000200632 547 ntBASIC19.82■□□□□ 0.76
Col9a2Q07643 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col9a2Q07643 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col9a2Q07643 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Col9a2Q07643 Fst-202ENSMUST00000223640 2612 ntBASIC19.81■□□□□ 0.76
Col9a2Q07643 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.81■□□□□ 0.76
Col9a2Q07643 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col9a2Q07643 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col9a2Q07643 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Col9a2Q07643 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.81■□□□□ 0.76
Col9a2Q07643 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col9a2Q07643 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col9a2Q07643 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.81■□□□□ 0.76
Col9a2Q07643 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Col9a2Q07643 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Col9a2Q07643 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col9a2Q07643 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col9a2Q07643 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Col9a2Q07643 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Col9a2Q07643 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col9a2Q07643 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Col9a2Q07643 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Col9a2Q07643 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.8■□□□□ 0.76
Col9a2Q07643 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.8■□□□□ 0.76
Col9a2Q07643 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Col9a2Q07643 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col9a2Q07643 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Col9a2Q07643 Gm15565-201ENSMUST00000118890 427 ntBASIC19.8■□□□□ 0.76
Col9a2Q07643 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Col9a2Q07643 Gm6576-201ENSMUST00000169678 883 ntBASIC19.8■□□□□ 0.76
Col9a2Q07643 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Col9a2Q07643 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.8■□□□□ 0.76
Col9a2Q07643 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col9a2Q07643 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.8■□□□□ 0.76
Col9a2Q07643 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col9a2Q07643 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.8■□□□□ 0.76
Col9a2Q07643 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col9a2Q07643 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col9a2Q07643 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Col9a2Q07643 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.79■□□□□ 0.76
Col9a2Q07643 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col9a2Q07643 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Col9a2Q07643 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Col9a2Q07643 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col9a2Q07643 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col9a2Q07643 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col9a2Q07643 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.79■□□□□ 0.76
Col9a2Q07643 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.79■□□□□ 0.76
Col9a2Q07643 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col9a2Q07643 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col9a2Q07643 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col9a2Q07643 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.78■□□□□ 0.76
Col9a2Q07643 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col9a2Q07643 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col9a2Q07643 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col9a2Q07643 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col9a2Q07643 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col9a2Q07643 Gm37292-201ENSMUST00000192062 758 ntBASIC19.78■□□□□ 0.76
Col9a2Q07643 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.78■□□□□ 0.76
Col9a2Q07643 Gm18025-201ENSMUST00000221733 862 ntBASIC19.78■□□□□ 0.76
Col9a2Q07643 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col9a2Q07643 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col9a2Q07643 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col9a2Q07643 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col9a2Q07643 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.78■□□□□ 0.76
Col9a2Q07643 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col9a2Q07643 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col9a2Q07643 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col9a2Q07643 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col9a2Q07643 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.77■□□□□ 0.76
Col9a2Q07643 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Col9a2Q07643 Gm15375-201ENSMUST00000119510 849 ntBASIC19.77■□□□□ 0.76
Col9a2Q07643 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.77■□□□□ 0.76
Col9a2Q07643 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col9a2Q07643 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col9a2Q07643 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.77■□□□□ 0.76
Col9a2Q07643 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col9a2Q07643 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col9a2Q07643 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Col9a2Q07643 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col9a2Q07643 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col9a2Q07643 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col9a2Q07643 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col9a2Q07643 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col9a2Q07643 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Col9a2Q07643 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
Col9a2Q07643 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col9a2Q07643 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col9a2Q07643 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.76■□□□□ 0.75
Col9a2Q07643 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.76■□□□□ 0.75
Col9a2Q07643 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Col9a2Q07643 Gm37055-201ENSMUST00000191866 133 ntBASIC19.76■□□□□ 0.75
Col9a2Q07643 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.76■□□□□ 0.75
Col9a2Q07643 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col9a2Q07643 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Col9a2Q07643 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 115.2 ms