Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.15■□□□□ 0.34
Nkx3-2P97503 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Nkx3-2P97503 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Nkx3-2P97503 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.15■□□□□ 0.34
Nkx3-2P97503 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx3-2P97503 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx3-2P97503 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.15■□□□□ 0.34
Nkx3-2P97503 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx3-2P97503 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Nkx3-2P97503 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Nkx3-2P97503 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Nkx3-2P97503 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx3-2P97503 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx3-2P97503 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.14■□□□□ 0.33
Nkx3-2P97503 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.14■□□□□ 0.33
Nkx3-2P97503 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx3-2P97503 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.14■□□□□ 0.33
Nkx3-2P97503 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx3-2P97503 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx3-2P97503 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Nkx3-2P97503 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.14■□□□□ 0.33
Nkx3-2P97503 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx3-2P97503 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx3-2P97503 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx3-2P97503 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.13■□□□□ 0.33
Nkx3-2P97503 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Nkx3-2P97503 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx3-2P97503 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx3-2P97503 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.13■□□□□ 0.33
Nkx3-2P97503 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx3-2P97503 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx3-2P97503 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx3-2P97503 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx3-2P97503 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Nkx3-2P97503 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.13■□□□□ 0.33
Nkx3-2P97503 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.13■□□□□ 0.33
Nkx3-2P97503 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.13■□□□□ 0.33
Nkx3-2P97503 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Nkx3-2P97503 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx3-2P97503 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx3-2P97503 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx3-2P97503 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx3-2P97503 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx3-2P97503 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx3-2P97503 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx3-2P97503 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.12■□□□□ 0.33
Nkx3-2P97503 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx3-2P97503 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Nkx3-2P97503 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx3-2P97503 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx3-2P97503 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
Nkx3-2P97503 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx3-2P97503 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx3-2P97503 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx3-2P97503 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.12■□□□□ 0.33
Nkx3-2P97503 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx3-2P97503 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx3-2P97503 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nkx3-2P97503 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nkx3-2P97503 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Nkx3-2P97503 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.11■□□□□ 0.33
Nkx3-2P97503 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx3-2P97503 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nkx3-2P97503 Gm5643-201ENSMUST00000117081 966 ntBASIC17.11■□□□□ 0.33
Nkx3-2P97503 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Nkx3-2P97503 Gm27275-201ENSMUST00000184318 272 ntBASIC17.11■□□□□ 0.33
Nkx3-2P97503 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx3-2P97503 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx3-2P97503 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.11■□□□□ 0.33
Nkx3-2P97503 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx3-2P97503 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx3-2P97503 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Nkx3-2P97503 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx3-2P97503 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx3-2P97503 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx3-2P97503 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx3-2P97503 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx3-2P97503 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx3-2P97503 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx3-2P97503 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx3-2P97503 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Nkx3-2P97503 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx3-2P97503 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx3-2P97503 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx3-2P97503 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx3-2P97503 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx3-2P97503 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.1■□□□□ 0.33
Nkx3-2P97503 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Nkx3-2P97503 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx3-2P97503 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx3-2P97503 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Nkx3-2P97503 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.1■□□□□ 0.33
Nkx3-2P97503 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx3-2P97503 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx3-2P97503 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx3-2P97503 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.1■□□□□ 0.33
Nkx3-2P97503 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx3-2P97503 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx3-2P97503 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx3-2P97503 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms