Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Six5P70178 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.04■□□□□ 0.32
Six5P70178 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Six5P70178 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six5P70178 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Six5P70178 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six5P70178 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Six5P70178 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Six5P70178 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six5P70178 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.03■□□□□ 0.32
Six5P70178 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six5P70178 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six5P70178 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Six5P70178 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six5P70178 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six5P70178 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Six5P70178 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.03■□□□□ 0.32
Six5P70178 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.03■□□□□ 0.32
Six5P70178 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Six5P70178 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Six5P70178 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six5P70178 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six5P70178 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Six5P70178 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six5P70178 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Six5P70178 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six5P70178 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Six5P70178 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six5P70178 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.02■□□□□ 0.32
Six5P70178 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Six5P70178 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Six5P70178 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six5P70178 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six5P70178 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Six5P70178 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Six5P70178 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Six5P70178 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six5P70178 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six5P70178 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six5P70178 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six5P70178 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Six5P70178 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Six5P70178 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
Six5P70178 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Six5P70178 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six5P70178 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six5P70178 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.01■□□□□ 0.31
Six5P70178 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Six5P70178 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six5P70178 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six5P70178 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.01■□□□□ 0.31
Six5P70178 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six5P70178 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Six5P70178 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Six5P70178 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Six5P70178 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17■□□□□ 0.31
Six5P70178 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Six5P70178 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Six5P70178 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17■□□□□ 0.31
Six5P70178 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17■□□□□ 0.31
Six5P70178 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17■□□□□ 0.31
Six5P70178 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17■□□□□ 0.31
Six5P70178 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17■□□□□ 0.31
Six5P70178 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17■□□□□ 0.31
Six5P70178 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Six5P70178 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17■□□□□ 0.31
Six5P70178 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Six5P70178 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17■□□□□ 0.31
Six5P70178 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Six5P70178 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Six5P70178 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.99■□□□□ 0.31
Six5P70178 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Six5P70178 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Six5P70178 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six5P70178 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six5P70178 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.99■□□□□ 0.31
Six5P70178 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six5P70178 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six5P70178 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.99■□□□□ 0.31
Six5P70178 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six5P70178 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.99■□□□□ 0.31
Six5P70178 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.99■□□□□ 0.31
Six5P70178 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.99■□□□□ 0.31
Six5P70178 Rab3c-203ENSMUST00000224180 967 ntBASIC16.99■□□□□ 0.31
Six5P70178 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six5P70178 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six5P70178 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six5P70178 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Six5P70178 Gm10602-201ENSMUST00000098239 609 ntBASIC16.99■□□□□ 0.31
Six5P70178 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.99■□□□□ 0.31
Six5P70178 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six5P70178 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six5P70178 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Six5P70178 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Six5P70178 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six5P70178 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six5P70178 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six5P70178 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Six5P70178 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Six5P70178 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms