Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Hmgb1P63158 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Hmgb1P63158 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20■□□□□ 0.79
Hmgb1P63158 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20■□□□□ 0.79
Hmgb1P63158 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgb1P63158 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgb1P63158 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Hmgb1P63158 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgb1P63158 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.99■□□□□ 0.79
Hmgb1P63158 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Hmgb1P63158 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Hmgb1P63158 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.99■□□□□ 0.79
Hmgb1P63158 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Hmgb1P63158 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgb1P63158 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgb1P63158 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgb1P63158 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgb1P63158 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgb1P63158 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgb1P63158 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgb1P63158 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Hmgb1P63158 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmgb1P63158 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmgb1P63158 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmgb1P63158 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Hmgb1P63158 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmgb1P63158 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Hmgb1P63158 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Hmgb1P63158 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Hmgb1P63158 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmgb1P63158 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.98■□□□□ 0.79
Hmgb1P63158 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Hmgb1P63158 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.98■□□□□ 0.79
Hmgb1P63158 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.98■□□□□ 0.79
Hmgb1P63158 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hmgb1P63158 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hmgb1P63158 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Hmgb1P63158 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.97■□□□□ 0.79
Hmgb1P63158 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hmgb1P63158 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.97■□□□□ 0.79
Hmgb1P63158 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hmgb1P63158 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hmgb1P63158 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Hmgb1P63158 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Hmgb1P63158 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hmgb1P63158 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hmgb1P63158 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hmgb1P63158 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hmgb1P63158 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Hmgb1P63158 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hmgb1P63158 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.96■□□□□ 0.79
Hmgb1P63158 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hmgb1P63158 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Hmgb1P63158 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Hmgb1P63158 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.95■□□□□ 0.78
Hmgb1P63158 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.95■□□□□ 0.78
Hmgb1P63158 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hmgb1P63158 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.95■□□□□ 0.78
Hmgb1P63158 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Hmgb1P63158 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hmgb1P63158 Gm22325-201ENSMUST00000158904 308 ntBASIC19.95■□□□□ 0.78
Hmgb1P63158 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hmgb1P63158 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Hmgb1P63158 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hmgb1P63158 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hmgb1P63158 Tgds-204ENSMUST00000228543 1594 ntBASIC19.95■□□□□ 0.78
Hmgb1P63158 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hmgb1P63158 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hmgb1P63158 Fst-202ENSMUST00000223640 2612 ntBASIC19.94■□□□□ 0.78
Hmgb1P63158 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hmgb1P63158 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmgb1P63158 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmgb1P63158 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmgb1P63158 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmgb1P63158 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.94■□□□□ 0.78
Hmgb1P63158 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmgb1P63158 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmgb1P63158 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmgb1P63158 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmgb1P63158 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.94■□□□□ 0.78
Hmgb1P63158 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmgb1P63158 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmgb1P63158 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hmgb1P63158 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmgb1P63158 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmgb1P63158 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmgb1P63158 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Hmgb1P63158 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Hmgb1P63158 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmgb1P63158 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmgb1P63158 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
Hmgb1P63158 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmgb1P63158 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.93■□□□□ 0.78
Hmgb1P63158 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
Hmgb1P63158 Gm6420-201ENSMUST00000193885 723 ntBASIC19.93■□□□□ 0.78
Hmgb1P63158 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.93■□□□□ 0.78
Hmgb1P63158 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmgb1P63158 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmgb1P63158 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmgb1P63158 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms