Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sec61a1P61620 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sec61a1P61620 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sec61a1P61620 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sec61a1P61620 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.01■□□□□ 0.15
Sec61a1P61620 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.01■□□□□ 0.15
Sec61a1P61620 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.01■□□□□ 0.15
Sec61a1P61620 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.01■□□□□ 0.15
Sec61a1P61620 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.01■□□□□ 0.15
Sec61a1P61620 Gm18671-201ENSMUST00000214826 683 ntBASIC16.01■□□□□ 0.15
Sec61a1P61620 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sec61a1P61620 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sec61a1P61620 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sec61a1P61620 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sec61a1P61620 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sec61a1P61620 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sec61a1P61620 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sec61a1P61620 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sec61a1P61620 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sec61a1P61620 Gm10849-201ENSMUST00000100397 618 ntBASIC16■□□□□ 0.15
Sec61a1P61620 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16■□□□□ 0.15
Sec61a1P61620 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16■□□□□ 0.15
Sec61a1P61620 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16■□□□□ 0.15
Sec61a1P61620 Gm10033-202ENSMUST00000211874 928 ntBASIC16■□□□□ 0.15
Sec61a1P61620 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sec61a1P61620 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sec61a1P61620 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sec61a1P61620 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sec61a1P61620 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sec61a1P61620 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sec61a1P61620 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sec61a1P61620 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Sec61a1P61620 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sec61a1P61620 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sec61a1P61620 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Sec61a1P61620 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
Sec61a1P61620 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sec61a1P61620 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sec61a1P61620 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sec61a1P61620 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sec61a1P61620 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sec61a1P61620 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sec61a1P61620 Gm7291-201ENSMUST00000199147 382 ntBASIC15.99■□□□□ 0.15
Sec61a1P61620 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC15.99■□□□□ 0.15
Sec61a1P61620 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
Sec61a1P61620 Reep4-203ENSMUST00000226563 1444 ntBASIC15.99■□□□□ 0.15
Sec61a1P61620 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sec61a1P61620 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
Sec61a1P61620 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sec61a1P61620 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Sec61a1P61620 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sec61a1P61620 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Sec61a1P61620 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Sec61a1P61620 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sec61a1P61620 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sec61a1P61620 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sec61a1P61620 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.98■□□□□ 0.15
Sec61a1P61620 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Sec61a1P61620 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.98■□□□□ 0.15
Sec61a1P61620 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sec61a1P61620 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.98■□□□□ 0.15
Sec61a1P61620 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Sec61a1P61620 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sec61a1P61620 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sec61a1P61620 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Sec61a1P61620 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sec61a1P61620 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sec61a1P61620 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Sec61a1P61620 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sec61a1P61620 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sec61a1P61620 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Sec61a1P61620 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sec61a1P61620 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sec61a1P61620 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sec61a1P61620 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sec61a1P61620 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sec61a1P61620 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sec61a1P61620 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sec61a1P61620 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sec61a1P61620 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Sec61a1P61620 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sec61a1P61620 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sec61a1P61620 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sec61a1P61620 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sec61a1P61620 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sec61a1P61620 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sec61a1P61620 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sec61a1P61620 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Sec61a1P61620 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sec61a1P61620 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sec61a1P61620 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sec61a1P61620 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sec61a1P61620 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sec61a1P61620 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.96■□□□□ 0.15
Sec61a1P61620 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sec61a1P61620 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Sec61a1P61620 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Sec61a1P61620 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.96■□□□□ 0.15
Sec61a1P61620 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sec61a1P61620 Gm27405-201ENSMUST00000184201 112 ntBASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms