Protein–RNA interactions for Protein: P60824

Cirbp, Cold-inducible RNA-binding protein, mousemouse

Known RBP Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CirbpP60824 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CirbpP60824 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CirbpP60824 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CirbpP60824 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CirbpP60824 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CirbpP60824 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CirbpP60824 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CirbpP60824 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CirbpP60824 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.34□□□□□ -0.27
CirbpP60824 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CirbpP60824 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CirbpP60824 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CirbpP60824 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CirbpP60824 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC13.34□□□□□ -0.27
CirbpP60824 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CirbpP60824 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CirbpP60824 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CirbpP60824 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CirbpP60824 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
CirbpP60824 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CirbpP60824 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CirbpP60824 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CirbpP60824 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
CirbpP60824 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CirbpP60824 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CirbpP60824 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CirbpP60824 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CirbpP60824 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC13.33□□□□□ -0.28
CirbpP60824 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CirbpP60824 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CirbpP60824 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CirbpP60824 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CirbpP60824 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CirbpP60824 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CirbpP60824 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CirbpP60824 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC13.32□□□□□ -0.28
CirbpP60824 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC13.32□□□□□ -0.28
CirbpP60824 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CirbpP60824 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CirbpP60824 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC13.32□□□□□ -0.28
CirbpP60824 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
CirbpP60824 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CirbpP60824 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CirbpP60824 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CirbpP60824 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CirbpP60824 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CirbpP60824 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CirbpP60824 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CirbpP60824 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CirbpP60824 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC13.32□□□□□ -0.28
CirbpP60824 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CirbpP60824 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CirbpP60824 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CirbpP60824 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CirbpP60824 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CirbpP60824 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CirbpP60824 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CirbpP60824 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CirbpP60824 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CirbpP60824 Gm10655-201ENSMUST00000098658 1397 ntBASIC13.32□□□□□ -0.28
CirbpP60824 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CirbpP60824 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CirbpP60824 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CirbpP60824 Gm29257-201ENSMUST00000186115 639 ntBASIC13.31□□□□□ -0.28
CirbpP60824 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CirbpP60824 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CirbpP60824 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.31□□□□□ -0.28
CirbpP60824 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC13.31□□□□□ -0.28
CirbpP60824 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CirbpP60824 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CirbpP60824 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.31□□□□□ -0.28
CirbpP60824 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.31□□□□□ -0.28
CirbpP60824 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CirbpP60824 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CirbpP60824 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CirbpP60824 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CirbpP60824 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CirbpP60824 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.3□□□□□ -0.28
CirbpP60824 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CirbpP60824 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CirbpP60824 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CirbpP60824 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CirbpP60824 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CirbpP60824 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CirbpP60824 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CirbpP60824 Gm27032-201ENSMUST00000183124 1116 ntBASIC13.3□□□□□ -0.28
CirbpP60824 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CirbpP60824 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CirbpP60824 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CirbpP60824 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CirbpP60824 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CirbpP60824 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CirbpP60824 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CirbpP60824 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CirbpP60824 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CirbpP60824 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CirbpP60824 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CirbpP60824 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC13.29□□□□□ -0.28
CirbpP60824 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CirbpP60824 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms