Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.3■□□□□ 0.2
Cldn18P56857 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Cldn18P56857 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn18P56857 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn18P56857 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.3■□□□□ 0.2
Cldn18P56857 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn18P56857 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn18P56857 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn18P56857 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.3■□□□□ 0.2
Cldn18P56857 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Cldn18P56857 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn18P56857 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn18P56857 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.3■□□□□ 0.2
Cldn18P56857 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn18P56857 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn18P56857 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn18P56857 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cldn18P56857 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn18P56857 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn18P56857 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.29■□□□□ 0.2
Cldn18P56857 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn18P56857 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.29■□□□□ 0.2
Cldn18P56857 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.29■□□□□ 0.2
Cldn18P56857 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn18P56857 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Cldn18P56857 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn18P56857 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn18P56857 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn18P56857 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn18P56857 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.29■□□□□ 0.2
Cldn18P56857 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn18P56857 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn18P56857 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.28■□□□□ 0.2
Cldn18P56857 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn18P56857 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn18P56857 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn18P56857 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn18P56857 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn18P56857 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn18P56857 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn18P56857 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.28■□□□□ 0.2
Cldn18P56857 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn18P56857 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.28■□□□□ 0.2
Cldn18P56857 Gm2559-201ENSMUST00000201323 363 ntBASIC16.28■□□□□ 0.2
Cldn18P56857 Gm20049-201ENSMUST00000219950 730 ntBASIC16.28■□□□□ 0.2
Cldn18P56857 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn18P56857 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn18P56857 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.28■□□□□ 0.2
Cldn18P56857 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.28■□□□□ 0.2
Cldn18P56857 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn18P56857 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn18P56857 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Cldn18P56857 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn18P56857 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn18P56857 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.27■□□□□ 0.2
Cldn18P56857 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn18P56857 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn18P56857 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Cldn18P56857 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn18P56857 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.27■□□□□ 0.2
Cldn18P56857 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.27■□□□□ 0.2
Cldn18P56857 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn18P56857 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.27■□□□□ 0.2
Cldn18P56857 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn18P56857 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cldn18P56857 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.27■□□□□ 0.19
Cldn18P56857 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cldn18P56857 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Cldn18P56857 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn18P56857 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn18P56857 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn18P56857 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn18P56857 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn18P56857 Gm12527-201ENSMUST00000117967 564 ntBASIC16.26■□□□□ 0.19
Cldn18P56857 Gm12896-201ENSMUST00000118430 226 ntBASIC16.26■□□□□ 0.19
Cldn18P56857 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.26■□□□□ 0.19
Cldn18P56857 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn18P56857 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn18P56857 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn18P56857 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.26■□□□□ 0.19
Cldn18P56857 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn18P56857 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.26■□□□□ 0.19
Cldn18P56857 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn18P56857 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Cldn18P56857 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn18P56857 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Cldn18P56857 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn18P56857 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn18P56857 Flg-201ENSMUST00000050758 1488 ntBASIC16.25■□□□□ 0.19
Cldn18P56857 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn18P56857 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn18P56857 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.25■□□□□ 0.19
Cldn18P56857 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.25■□□□□ 0.19
Cldn18P56857 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.25■□□□□ 0.19
Cldn18P56857 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn18P56857 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn18P56857 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn18P56857 Dio3-201ENSMUST00000097228 1449 ntBASIC16.25■□□□□ 0.19
Cldn18P56857 Tgds-204ENSMUST00000228543 1594 ntBASIC16.25■□□□□ 0.19
Cldn18P56857 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms