Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.67■□□□□ 0.9
Atoh1P48985 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atoh1P48985 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atoh1P48985 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.67■□□□□ 0.9
Atoh1P48985 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atoh1P48985 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atoh1P48985 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Atoh1P48985 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atoh1P48985 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Atoh1P48985 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.66■□□□□ 0.9
Atoh1P48985 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.66■□□□□ 0.9
Atoh1P48985 Gm38027-201ENSMUST00000192315 235 ntBASIC20.66■□□□□ 0.9
Atoh1P48985 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atoh1P48985 AC134329.2-201ENSMUST00000217897 428 ntBASIC20.66■□□□□ 0.9
Atoh1P48985 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atoh1P48985 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
Atoh1P48985 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atoh1P48985 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atoh1P48985 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Atoh1P48985 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Atoh1P48985 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atoh1P48985 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atoh1P48985 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Atoh1P48985 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Atoh1P48985 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Atoh1P48985 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Atoh1P48985 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atoh1P48985 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.65■□□□□ 0.9
Atoh1P48985 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.65■□□□□ 0.9
Atoh1P48985 Mir2861-201ENSMUST00000175539 82 ntBASIC20.65■□□□□ 0.9
Atoh1P48985 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.65■□□□□ 0.9
Atoh1P48985 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Atoh1P48985 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.65■□□□□ 0.9
Atoh1P48985 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atoh1P48985 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.65■□□□□ 0.9
Atoh1P48985 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atoh1P48985 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atoh1P48985 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atoh1P48985 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Atoh1P48985 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atoh1P48985 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.64■□□□□ 0.89
Atoh1P48985 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Atoh1P48985 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Atoh1P48985 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Atoh1P48985 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atoh1P48985 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.64■□□□□ 0.89
Atoh1P48985 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atoh1P48985 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atoh1P48985 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atoh1P48985 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atoh1P48985 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Atoh1P48985 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Atoh1P48985 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Atoh1P48985 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atoh1P48985 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atoh1P48985 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atoh1P48985 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atoh1P48985 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atoh1P48985 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atoh1P48985 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atoh1P48985 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.63■□□□□ 0.89
Atoh1P48985 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atoh1P48985 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atoh1P48985 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atoh1P48985 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atoh1P48985 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.62■□□□□ 0.89
Atoh1P48985 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atoh1P48985 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Atoh1P48985 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atoh1P48985 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Atoh1P48985 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atoh1P48985 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atoh1P48985 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.61■□□□□ 0.89
Atoh1P48985 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atoh1P48985 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atoh1P48985 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Atoh1P48985 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atoh1P48985 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Atoh1P48985 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atoh1P48985 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atoh1P48985 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atoh1P48985 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atoh1P48985 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Atoh1P48985 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Atoh1P48985 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
Atoh1P48985 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.6■□□□□ 0.89
Atoh1P48985 Gm25016-201ENSMUST00000158399 131 ntBASIC20.6■□□□□ 0.89
Atoh1P48985 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Atoh1P48985 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Atoh1P48985 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Atoh1P48985 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atoh1P48985 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atoh1P48985 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atoh1P48985 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.6■□□□□ 0.89
Atoh1P48985 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atoh1P48985 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Atoh1P48985 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atoh1P48985 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Atoh1P48985 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atoh1P48985 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms