Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.5■□□□□ 0.39
Rph3aP47708 Gm6211-202ENSMUST00000167849 925 ntBASIC17.5■□□□□ 0.39
Rph3aP47708 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.5■□□□□ 0.39
Rph3aP47708 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rph3aP47708 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.5■□□□□ 0.39
Rph3aP47708 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rph3aP47708 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rph3aP47708 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Rph3aP47708 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rph3aP47708 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.5■□□□□ 0.39
Rph3aP47708 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Rph3aP47708 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rph3aP47708 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Rph3aP47708 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rph3aP47708 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Rph3aP47708 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Rph3aP47708 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rph3aP47708 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.49■□□□□ 0.39
Rph3aP47708 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Rph3aP47708 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rph3aP47708 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.49■□□□□ 0.39
Rph3aP47708 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Rph3aP47708 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rph3aP47708 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Rph3aP47708 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rph3aP47708 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rph3aP47708 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rph3aP47708 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rph3aP47708 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rph3aP47708 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Rph3aP47708 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.49■□□□□ 0.39
Rph3aP47708 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rph3aP47708 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rph3aP47708 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.48■□□□□ 0.39
Rph3aP47708 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.48■□□□□ 0.39
Rph3aP47708 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rph3aP47708 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.48■□□□□ 0.39
Rph3aP47708 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rph3aP47708 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rph3aP47708 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rph3aP47708 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.48■□□□□ 0.39
Rph3aP47708 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.48■□□□□ 0.39
Rph3aP47708 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rph3aP47708 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rph3aP47708 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rph3aP47708 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rph3aP47708 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rph3aP47708 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rph3aP47708 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rph3aP47708 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rph3aP47708 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rph3aP47708 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Rph3aP47708 Grk6-206ENSMUST00000224995 2971 ntBASIC17.48■□□□□ 0.39
Rph3aP47708 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rph3aP47708 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rph3aP47708 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rph3aP47708 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Rph3aP47708 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.47■□□□□ 0.39
Rph3aP47708 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Rph3aP47708 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rph3aP47708 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rph3aP47708 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rph3aP47708 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rph3aP47708 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rph3aP47708 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
Rph3aP47708 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rph3aP47708 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rph3aP47708 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rph3aP47708 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Rph3aP47708 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rph3aP47708 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rph3aP47708 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rph3aP47708 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Rph3aP47708 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Rph3aP47708 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.46■□□□□ 0.39
Rph3aP47708 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rph3aP47708 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rph3aP47708 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rph3aP47708 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.46■□□□□ 0.39
Rph3aP47708 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rph3aP47708 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rph3aP47708 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rph3aP47708 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rph3aP47708 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rph3aP47708 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rph3aP47708 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rph3aP47708 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rph3aP47708 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rph3aP47708 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rph3aP47708 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rph3aP47708 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rph3aP47708 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rph3aP47708 Gm13148-201ENSMUST00000118892 745 ntBASIC17.45■□□□□ 0.38
Rph3aP47708 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.45■□□□□ 0.38
Rph3aP47708 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.45■□□□□ 0.38
Rph3aP47708 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rph3aP47708 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Rph3aP47708 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rph3aP47708 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rph3aP47708 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms