Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.73■□□□□ 0.59
Msh2P43247 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh2P43247 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.73■□□□□ 0.59
Msh2P43247 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh2P43247 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh2P43247 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Msh2P43247 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh2P43247 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.73■□□□□ 0.59
Msh2P43247 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh2P43247 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Msh2P43247 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.73■□□□□ 0.59
Msh2P43247 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh2P43247 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh2P43247 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh2P43247 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh2P43247 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Msh2P43247 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
Msh2P43247 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh2P43247 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh2P43247 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh2P43247 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Msh2P43247 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh2P43247 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh2P43247 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh2P43247 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh2P43247 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh2P43247 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.71■□□□□ 0.59
Msh2P43247 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh2P43247 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.71■□□□□ 0.59
Msh2P43247 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh2P43247 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh2P43247 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh2P43247 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh2P43247 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Msh2P43247 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.71■□□□□ 0.58
Msh2P43247 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Msh2P43247 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
Msh2P43247 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh2P43247 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh2P43247 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh2P43247 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Msh2P43247 Gm26571-201ENSMUST00000181399 666 ntBASIC18.7■□□□□ 0.58
Msh2P43247 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh2P43247 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.7■□□□□ 0.58
Msh2P43247 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.7■□□□□ 0.58
Msh2P43247 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh2P43247 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh2P43247 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh2P43247 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Msh2P43247 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Msh2P43247 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Msh2P43247 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Msh2P43247 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.69■□□□□ 0.58
Msh2P43247 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Msh2P43247 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Msh2P43247 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Msh2P43247 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Msh2P43247 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Msh2P43247 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Msh2P43247 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh2P43247 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh2P43247 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh2P43247 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh2P43247 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh2P43247 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh2P43247 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh2P43247 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Msh2P43247 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh2P43247 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.68■□□□□ 0.58
Msh2P43247 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh2P43247 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh2P43247 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Msh2P43247 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.68■□□□□ 0.58
Msh2P43247 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.68■□□□□ 0.58
Msh2P43247 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh2P43247 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh2P43247 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Msh2P43247 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Msh2P43247 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh2P43247 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh2P43247 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh2P43247 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh2P43247 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh2P43247 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh2P43247 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.68■□□□□ 0.58
Msh2P43247 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.67■□□□□ 0.58
Msh2P43247 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh2P43247 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh2P43247 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh2P43247 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh2P43247 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Msh2P43247 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Msh2P43247 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh2P43247 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh2P43247 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh2P43247 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.67■□□□□ 0.58
Msh2P43247 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Msh2P43247 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh2P43247 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh2P43247 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms