Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Nkx2-2P42586 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-2P42586 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-2P42586 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-2P42586 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-2P42586 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.69■□□□□ 0.26
Nkx2-2P42586 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.69■□□□□ 0.26
Nkx2-2P42586 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-2P42586 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.69■□□□□ 0.26
Nkx2-2P42586 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-2P42586 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Nkx2-2P42586 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.69■□□□□ 0.26
Nkx2-2P42586 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-2P42586 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Nkx2-2P42586 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.69■□□□□ 0.26
Nkx2-2P42586 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Nkx2-2P42586 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-2P42586 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-2P42586 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Nkx2-2P42586 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-2P42586 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-2P42586 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-2P42586 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Nkx2-2P42586 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-2P42586 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-2P42586 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-2P42586 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-2P42586 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-2P42586 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Nkx2-2P42586 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-2P42586 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-2P42586 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-2P42586 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-2P42586 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.68■□□□□ 0.26
Nkx2-2P42586 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-2P42586 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-2P42586 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-2P42586 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-2P42586 Gm10602-201ENSMUST00000098239 609 ntBASIC16.68■□□□□ 0.26
Nkx2-2P42586 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.68■□□□□ 0.26
Nkx2-2P42586 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-2P42586 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-2P42586 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.68■□□□□ 0.26
Nkx2-2P42586 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-2P42586 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-2P42586 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-2P42586 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-2P42586 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-2P42586 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-2P42586 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-2P42586 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-2P42586 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.67■□□□□ 0.26
Nkx2-2P42586 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.67■□□□□ 0.26
Nkx2-2P42586 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.67■□□□□ 0.26
Nkx2-2P42586 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-2P42586 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-2P42586 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-2P42586 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-2P42586 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-2P42586 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-2P42586 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.67■□□□□ 0.26
Nkx2-2P42586 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-2P42586 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-2P42586 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-2P42586 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Nkx2-2P42586 Gm2399-201ENSMUST00000104944 225 ntBASIC16.66■□□□□ 0.26
Nkx2-2P42586 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-2P42586 Gm5408-201ENSMUST00000197998 747 ntBASIC16.66■□□□□ 0.26
Nkx2-2P42586 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-2P42586 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-2P42586 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-2P42586 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-2P42586 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-2P42586 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-2P42586 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-2P42586 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-2P42586 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Nkx2-2P42586 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-2P42586 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-2P42586 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Nkx2-2P42586 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-2P42586 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.65■□□□□ 0.26
Nkx2-2P42586 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-2P42586 Grk6-206ENSMUST00000224995 2971 ntBASIC16.65■□□□□ 0.26
Nkx2-2P42586 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-2P42586 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-2P42586 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-2P42586 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-2P42586 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-2P42586 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-2P42586 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-2P42586 Fst-202ENSMUST00000223640 2612 ntBASIC16.65■□□□□ 0.26
Nkx2-2P42586 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Nkx2-2P42586 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-2P42586 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Nkx2-2P42586 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-2P42586 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.64■□□□□ 0.25
Nkx2-2P42586 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
Nkx2-2P42586 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-2P42586 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms