Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.41■□□□□ 0.38
Tnfsf9P41274 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfsf9P41274 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfsf9P41274 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfsf9P41274 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfsf9P41274 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfsf9P41274 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfsf9P41274 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfsf9P41274 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfsf9P41274 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Tnfsf9P41274 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfsf9P41274 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Tnfsf9P41274 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Tnfsf9P41274 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.4■□□□□ 0.38
Tnfsf9P41274 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfsf9P41274 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.4■□□□□ 0.38
Tnfsf9P41274 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfsf9P41274 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfsf9P41274 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfsf9P41274 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfsf9P41274 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfsf9P41274 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfsf9P41274 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfsf9P41274 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Tnfsf9P41274 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tnfsf9P41274 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tnfsf9P41274 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Tnfsf9P41274 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.39■□□□□ 0.37
Tnfsf9P41274 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tnfsf9P41274 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.39■□□□□ 0.37
Tnfsf9P41274 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tnfsf9P41274 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Tnfsf9P41274 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfsf9P41274 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfsf9P41274 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
Tnfsf9P41274 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfsf9P41274 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfsf9P41274 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfsf9P41274 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.38■□□□□ 0.37
Tnfsf9P41274 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfsf9P41274 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfsf9P41274 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfsf9P41274 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfsf9P41274 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfsf9P41274 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfsf9P41274 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Tnfsf9P41274 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfsf9P41274 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Tnfsf9P41274 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.37■□□□□ 0.37
Tnfsf9P41274 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Tnfsf9P41274 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfsf9P41274 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfsf9P41274 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfsf9P41274 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfsf9P41274 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfsf9P41274 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.36■□□□□ 0.37
Tnfsf9P41274 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Tnfsf9P41274 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfsf9P41274 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfsf9P41274 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Tnfsf9P41274 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfsf9P41274 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfsf9P41274 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Tnfsf9P41274 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Tnfsf9P41274 Gm15378-201ENSMUST00000121894 207 ntBASIC17.36■□□□□ 0.37
Tnfsf9P41274 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.36■□□□□ 0.37
Tnfsf9P41274 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.36■□□□□ 0.37
Tnfsf9P41274 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.36■□□□□ 0.37
Tnfsf9P41274 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.36■□□□□ 0.37
Tnfsf9P41274 Zfp783-201ENSMUST00000095946 670 ntBASIC17.36■□□□□ 0.37
Tnfsf9P41274 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfsf9P41274 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfsf9P41274 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfsf9P41274 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfsf9P41274 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfsf9P41274 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfsf9P41274 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfsf9P41274 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfsf9P41274 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfsf9P41274 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfsf9P41274 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.35■□□□□ 0.37
Tnfsf9P41274 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfsf9P41274 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.35■□□□□ 0.37
Tnfsf9P41274 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.35■□□□□ 0.37
Tnfsf9P41274 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfsf9P41274 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfsf9P41274 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfsf9P41274 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfsf9P41274 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfsf9P41274 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfsf9P41274 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfsf9P41274 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfsf9P41274 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfsf9P41274 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfsf9P41274 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfsf9P41274 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.34■□□□□ 0.37
Tnfsf9P41274 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfsf9P41274 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfsf9P41274 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Tnfsf9P41274 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms