Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.82■□□□□ 0.6
Cxcl12P40224 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cxcl12P40224 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cxcl12P40224 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cxcl12P40224 Gm27704-201ENSMUST00000185094 107 ntBASIC18.82■□□□□ 0.6
Cxcl12P40224 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.82■□□□□ 0.6
Cxcl12P40224 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cxcl12P40224 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cxcl12P40224 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cxcl12P40224 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Cxcl12P40224 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cxcl12P40224 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cxcl12P40224 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cxcl12P40224 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.81■□□□□ 0.6
Cxcl12P40224 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cxcl12P40224 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.81■□□□□ 0.6
Cxcl12P40224 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cxcl12P40224 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.81■□□□□ 0.6
Cxcl12P40224 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cxcl12P40224 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cxcl12P40224 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cxcl12P40224 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cxcl12P40224 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cxcl12P40224 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cxcl12P40224 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cxcl12P40224 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cxcl12P40224 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cxcl12P40224 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cxcl12P40224 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cxcl12P40224 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cxcl12P40224 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cxcl12P40224 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cxcl12P40224 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.79■□□□□ 0.6
Cxcl12P40224 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.79■□□□□ 0.6
Cxcl12P40224 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.79■□□□□ 0.6
Cxcl12P40224 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cxcl12P40224 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cxcl12P40224 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cxcl12P40224 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cxcl12P40224 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cxcl12P40224 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cxcl12P40224 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cxcl12P40224 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Cxcl12P40224 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cxcl12P40224 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cxcl12P40224 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cxcl12P40224 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cxcl12P40224 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cxcl12P40224 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cxcl12P40224 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Cxcl12P40224 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cxcl12P40224 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cxcl12P40224 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cxcl12P40224 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.78■□□□□ 0.6
Cxcl12P40224 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cxcl12P40224 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cxcl12P40224 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.78■□□□□ 0.6
Cxcl12P40224 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cxcl12P40224 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cxcl12P40224 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cxcl12P40224 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cxcl12P40224 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cxcl12P40224 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cxcl12P40224 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cxcl12P40224 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cxcl12P40224 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cxcl12P40224 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cxcl12P40224 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cxcl12P40224 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.77■□□□□ 0.6
Cxcl12P40224 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.77■□□□□ 0.6
Cxcl12P40224 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.77■□□□□ 0.6
Cxcl12P40224 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cxcl12P40224 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Cxcl12P40224 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cxcl12P40224 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.77■□□□□ 0.59
Cxcl12P40224 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
Cxcl12P40224 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cxcl12P40224 Gm16061-201ENSMUST00000122167 857 ntBASIC18.76■□□□□ 0.59
Cxcl12P40224 Gm28033-201ENSMUST00000184224 96 ntBASIC18.76■□□□□ 0.59
Cxcl12P40224 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.76■□□□□ 0.59
Cxcl12P40224 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cxcl12P40224 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cxcl12P40224 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cxcl12P40224 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cxcl12P40224 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Cxcl12P40224 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cxcl12P40224 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cxcl12P40224 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cxcl12P40224 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cxcl12P40224 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cxcl12P40224 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cxcl12P40224 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Cxcl12P40224 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.75■□□□□ 0.59
Cxcl12P40224 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cxcl12P40224 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cxcl12P40224 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.75■□□□□ 0.59
Cxcl12P40224 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.75■□□□□ 0.59
Cxcl12P40224 Gm17807-201ENSMUST00000186869 298 ntBASIC18.75■□□□□ 0.59
Cxcl12P40224 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cxcl12P40224 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms