Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HmgclP38060 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HmgclP38060 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.92■□□□□ 0.46
HmgclP38060 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HmgclP38060 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
HmgclP38060 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HmgclP38060 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HmgclP38060 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HmgclP38060 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HmgclP38060 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
HmgclP38060 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.92■□□□□ 0.46
HmgclP38060 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.91■□□□□ 0.46
HmgclP38060 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HmgclP38060 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
HmgclP38060 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HmgclP38060 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HmgclP38060 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HmgclP38060 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HmgclP38060 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HmgclP38060 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.91■□□□□ 0.46
HmgclP38060 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.91■□□□□ 0.46
HmgclP38060 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HmgclP38060 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HmgclP38060 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.91■□□□□ 0.46
HmgclP38060 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HmgclP38060 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HmgclP38060 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HmgclP38060 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.91■□□□□ 0.46
HmgclP38060 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HmgclP38060 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
HmgclP38060 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HmgclP38060 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HmgclP38060 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HmgclP38060 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HmgclP38060 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HmgclP38060 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HmgclP38060 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HmgclP38060 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HmgclP38060 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HmgclP38060 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.9■□□□□ 0.46
HmgclP38060 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.9■□□□□ 0.46
HmgclP38060 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.9■□□□□ 0.46
HmgclP38060 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HmgclP38060 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HmgclP38060 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HmgclP38060 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HmgclP38060 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HmgclP38060 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HmgclP38060 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HmgclP38060 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HmgclP38060 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HmgclP38060 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HmgclP38060 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HmgclP38060 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HmgclP38060 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HmgclP38060 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.89■□□□□ 0.45
HmgclP38060 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
HmgclP38060 Gm2399-201ENSMUST00000104944 225 ntBASIC17.89■□□□□ 0.45
HmgclP38060 Gm5408-201ENSMUST00000197998 747 ntBASIC17.89■□□□□ 0.45
HmgclP38060 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HmgclP38060 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HmgclP38060 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HmgclP38060 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HmgclP38060 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.89■□□□□ 0.45
HmgclP38060 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HmgclP38060 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HmgclP38060 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HmgclP38060 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HmgclP38060 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HmgclP38060 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HmgclP38060 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HmgclP38060 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HmgclP38060 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HmgclP38060 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.88■□□□□ 0.45
HmgclP38060 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.88■□□□□ 0.45
HmgclP38060 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HmgclP38060 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
HmgclP38060 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HmgclP38060 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.88■□□□□ 0.45
HmgclP38060 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.88■□□□□ 0.45
HmgclP38060 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HmgclP38060 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HmgclP38060 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HmgclP38060 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HmgclP38060 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HmgclP38060 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
HmgclP38060 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.87■□□□□ 0.45
HmgclP38060 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HmgclP38060 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HmgclP38060 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.87■□□□□ 0.45
HmgclP38060 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HmgclP38060 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HmgclP38060 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
HmgclP38060 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.87■□□□□ 0.45
HmgclP38060 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HmgclP38060 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.87■□□□□ 0.45
HmgclP38060 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HmgclP38060 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HmgclP38060 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HmgclP38060 Fst-202ENSMUST00000223640 2612 ntBASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms