Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
LdlrP35951 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LdlrP35951 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
LdlrP35951 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.08■□□□□ 0.48
LdlrP35951 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LdlrP35951 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
LdlrP35951 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.07■□□□□ 0.48
LdlrP35951 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.07■□□□□ 0.48
LdlrP35951 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LdlrP35951 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LdlrP35951 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LdlrP35951 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
LdlrP35951 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LdlrP35951 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.07■□□□□ 0.48
LdlrP35951 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LdlrP35951 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.07■□□□□ 0.48
LdlrP35951 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LdlrP35951 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LdlrP35951 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
LdlrP35951 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LdlrP35951 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.06■□□□□ 0.48
LdlrP35951 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LdlrP35951 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
LdlrP35951 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
LdlrP35951 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LdlrP35951 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LdlrP35951 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LdlrP35951 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.06■□□□□ 0.48
LdlrP35951 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LdlrP35951 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LdlrP35951 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LdlrP35951 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.06■□□□□ 0.48
LdlrP35951 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LdlrP35951 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LdlrP35951 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LdlrP35951 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LdlrP35951 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LdlrP35951 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LdlrP35951 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LdlrP35951 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LdlrP35951 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
LdlrP35951 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LdlrP35951 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
LdlrP35951 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LdlrP35951 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LdlrP35951 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LdlrP35951 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
LdlrP35951 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.04■□□□□ 0.48
LdlrP35951 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LdlrP35951 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LdlrP35951 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.04■□□□□ 0.48
LdlrP35951 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LdlrP35951 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
LdlrP35951 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
LdlrP35951 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.04■□□□□ 0.48
LdlrP35951 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LdlrP35951 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LdlrP35951 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LdlrP35951 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LdlrP35951 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LdlrP35951 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LdlrP35951 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LdlrP35951 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LdlrP35951 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LdlrP35951 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LdlrP35951 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.03■□□□□ 0.48
LdlrP35951 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.03■□□□□ 0.48
LdlrP35951 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LdlrP35951 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LdlrP35951 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LdlrP35951 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LdlrP35951 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LdlrP35951 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LdlrP35951 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LdlrP35951 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.03■□□□□ 0.48
LdlrP35951 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LdlrP35951 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LdlrP35951 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LdlrP35951 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LdlrP35951 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
LdlrP35951 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LdlrP35951 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LdlrP35951 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.02■□□□□ 0.48
LdlrP35951 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.02■□□□□ 0.48
LdlrP35951 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.02■□□□□ 0.48
LdlrP35951 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
LdlrP35951 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LdlrP35951 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LdlrP35951 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.02■□□□□ 0.48
LdlrP35951 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LdlrP35951 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
LdlrP35951 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LdlrP35951 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.02■□□□□ 0.47
LdlrP35951 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LdlrP35951 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.01■□□□□ 0.47
LdlrP35951 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LdlrP35951 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.01■□□□□ 0.47
LdlrP35951 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LdlrP35951 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LdlrP35951 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms