Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sox5P35710 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sox5P35710 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sox5P35710 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Sox5P35710 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sox5P35710 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sox5P35710 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Sox5P35710 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sox5P35710 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sox5P35710 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sox5P35710 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.87■□□□□ 0.77
Sox5P35710 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sox5P35710 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sox5P35710 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sox5P35710 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sox5P35710 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Sox5P35710 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Sox5P35710 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.86■□□□□ 0.77
Sox5P35710 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sox5P35710 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.86■□□□□ 0.77
Sox5P35710 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sox5P35710 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sox5P35710 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sox5P35710 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.86■□□□□ 0.77
Sox5P35710 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.86■□□□□ 0.77
Sox5P35710 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sox5P35710 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sox5P35710 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox5P35710 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox5P35710 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Sox5P35710 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Sox5P35710 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox5P35710 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox5P35710 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox5P35710 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox5P35710 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox5P35710 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox5P35710 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox5P35710 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox5P35710 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sox5P35710 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox5P35710 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox5P35710 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.85■□□□□ 0.77
Sox5P35710 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox5P35710 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox5P35710 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox5P35710 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sox5P35710 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Sox5P35710 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sox5P35710 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sox5P35710 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sox5P35710 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.84■□□□□ 0.77
Sox5P35710 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.84■□□□□ 0.77
Sox5P35710 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sox5P35710 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sox5P35710 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sox5P35710 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sox5P35710 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sox5P35710 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sox5P35710 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sox5P35710 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sox5P35710 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Sox5P35710 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sox5P35710 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sox5P35710 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sox5P35710 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sox5P35710 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sox5P35710 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sox5P35710 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sox5P35710 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Sox5P35710 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
Sox5P35710 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sox5P35710 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Sox5P35710 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.82■□□□□ 0.76
Sox5P35710 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sox5P35710 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Sox5P35710 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
Sox5P35710 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Sox5P35710 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sox5P35710 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sox5P35710 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sox5P35710 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sox5P35710 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sox5P35710 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sox5P35710 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sox5P35710 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sox5P35710 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sox5P35710 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Sox5P35710 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Sox5P35710 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sox5P35710 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sox5P35710 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sox5P35710 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.81■□□□□ 0.76
Sox5P35710 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.81■□□□□ 0.76
Sox5P35710 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Sox5P35710 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sox5P35710 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sox5P35710 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sox5P35710 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sox5P35710 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms