Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rom1P32958 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rom1P32958 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rom1P32958 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rom1P32958 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.42□□□□□ -0.1
Rom1P32958 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rom1P32958 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rom1P32958 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rom1P32958 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.42□□□□□ -0.1
Rom1P32958 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rom1P32958 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rom1P32958 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Rom1P32958 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC14.42□□□□□ -0.1
Rom1P32958 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC14.42□□□□□ -0.1
Rom1P32958 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rom1P32958 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.42□□□□□ -0.1
Rom1P32958 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rom1P32958 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rom1P32958 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Rom1P32958 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rom1P32958 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Rom1P32958 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rom1P32958 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rom1P32958 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rom1P32958 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rom1P32958 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rom1P32958 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rom1P32958 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rom1P32958 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rom1P32958 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.41□□□□□ -0.1
Rom1P32958 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rom1P32958 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rom1P32958 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rom1P32958 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rom1P32958 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rom1P32958 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rom1P32958 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rom1P32958 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.41□□□□□ -0.1
Rom1P32958 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rom1P32958 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rom1P32958 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rom1P32958 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rom1P32958 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.41□□□□□ -0.1
Rom1P32958 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rom1P32958 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Rom1P32958 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rom1P32958 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rom1P32958 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rom1P32958 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
Rom1P32958 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.4□□□□□ -0.1
Rom1P32958 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rom1P32958 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC14.4□□□□□ -0.1
Rom1P32958 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC14.4□□□□□ -0.1
Rom1P32958 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC14.4□□□□□ -0.1
Rom1P32958 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rom1P32958 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rom1P32958 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rom1P32958 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rom1P32958 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rom1P32958 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rom1P32958 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rom1P32958 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.39□□□□□ -0.11
Rom1P32958 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rom1P32958 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rom1P32958 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rom1P32958 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rom1P32958 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rom1P32958 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rom1P32958 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rom1P32958 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC14.39□□□□□ -0.11
Rom1P32958 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC14.39□□□□□ -0.11
Rom1P32958 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rom1P32958 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Rom1P32958 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rom1P32958 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Rom1P32958 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rom1P32958 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rom1P32958 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rom1P32958 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Rom1P32958 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rom1P32958 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rom1P32958 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Rom1P32958 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rom1P32958 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rom1P32958 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rom1P32958 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rom1P32958 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rom1P32958 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Rom1P32958 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rom1P32958 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rom1P32958 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rom1P32958 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rom1P32958 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.38□□□□□ -0.11
Rom1P32958 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.38□□□□□ -0.11
Rom1P32958 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rom1P32958 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rom1P32958 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rom1P32958 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rom1P32958 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.38□□□□□ -0.11
Rom1P32958 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms