Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc6a1P31648 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Slc6a1P31648 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc6a1P31648 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc6a1P31648 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc6a1P31648 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc6a1P31648 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Slc6a1P31648 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Slc6a1P31648 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.64■□□□□ 0.09
Slc6a1P31648 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Slc6a1P31648 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Slc6a1P31648 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc6a1P31648 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc6a1P31648 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Slc6a1P31648 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Slc6a1P31648 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc6a1P31648 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Slc6a1P31648 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Slc6a1P31648 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.63■□□□□ 0.09
Slc6a1P31648 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Slc6a1P31648 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Slc6a1P31648 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC15.63■□□□□ 0.09
Slc6a1P31648 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc6a1P31648 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Slc6a1P31648 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc6a1P31648 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Slc6a1P31648 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc6a1P31648 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc6a1P31648 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc6a1P31648 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc6a1P31648 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc6a1P31648 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc6a1P31648 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc6a1P31648 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Slc6a1P31648 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc6a1P31648 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Slc6a1P31648 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc6a1P31648 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc6a1P31648 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.62■□□□□ 0.09
Slc6a1P31648 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Slc6a1P31648 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc6a1P31648 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc6a1P31648 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC15.62■□□□□ 0.09
Slc6a1P31648 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Slc6a1P31648 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.62■□□□□ 0.09
Slc6a1P31648 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC15.62■□□□□ 0.09
Slc6a1P31648 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc6a1P31648 Serp2-204ENSMUST00000228055 705 ntBASIC15.62■□□□□ 0.09
Slc6a1P31648 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc6a1P31648 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Slc6a1P31648 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc6a1P31648 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Slc6a1P31648 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc6a1P31648 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc6a1P31648 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.62■□□□□ 0.09
Slc6a1P31648 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc6a1P31648 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc6a1P31648 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc6a1P31648 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc6a1P31648 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc6a1P31648 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc6a1P31648 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc6a1P31648 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.61■□□□□ 0.09
Slc6a1P31648 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Slc6a1P31648 Gm6085-201ENSMUST00000182774 1470 ntBASIC15.61■□□□□ 0.09
Slc6a1P31648 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc6a1P31648 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc6a1P31648 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Slc6a1P31648 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC15.61■□□□□ 0.09
Slc6a1P31648 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Slc6a1P31648 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Slc6a1P31648 Gm43137-201ENSMUST00000198052 594 ntBASIC15.61■□□□□ 0.09
Slc6a1P31648 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.61■□□□□ 0.09
Slc6a1P31648 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc6a1P31648 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc6a1P31648 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
Slc6a1P31648 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc6a1P31648 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc6a1P31648 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc6a1P31648 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Slc6a1P31648 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.6■□□□□ 0.09
Slc6a1P31648 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC15.6■□□□□ 0.09
Slc6a1P31648 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Slc6a1P31648 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Slc6a1P31648 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Slc6a1P31648 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Slc6a1P31648 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slc6a1P31648 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
Slc6a1P31648 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Slc6a1P31648 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slc6a1P31648 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Slc6a1P31648 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Slc6a1P31648 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.59■□□□□ 0.09
Slc6a1P31648 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slc6a1P31648 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC15.59■□□□□ 0.09
Slc6a1P31648 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
Slc6a1P31648 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slc6a1P31648 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slc6a1P31648 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Slc6a1P31648 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms