Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cd40P27512 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Cd40P27512 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Cd40P27512 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cd40P27512 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Cd40P27512 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cd40P27512 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cd40P27512 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cd40P27512 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Cd40P27512 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Cd40P27512 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cd40P27512 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.47■□□□□ 0.23
Cd40P27512 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cd40P27512 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cd40P27512 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cd40P27512 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cd40P27512 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Cd40P27512 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cd40P27512 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cd40P27512 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.47■□□□□ 0.23
Cd40P27512 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cd40P27512 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cd40P27512 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Cd40P27512 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cd40P27512 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd40P27512 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd40P27512 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Cd40P27512 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.46■□□□□ 0.23
Cd40P27512 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.46■□□□□ 0.23
Cd40P27512 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.46■□□□□ 0.23
Cd40P27512 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.46■□□□□ 0.23
Cd40P27512 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd40P27512 Gm4968-201ENSMUST00000071458 858 ntBASIC16.46■□□□□ 0.23
Cd40P27512 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd40P27512 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd40P27512 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd40P27512 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd40P27512 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd40P27512 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd40P27512 Tgds-204ENSMUST00000228543 1594 ntBASIC16.46■□□□□ 0.23
Cd40P27512 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.46■□□□□ 0.22
Cd40P27512 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cd40P27512 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cd40P27512 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.45■□□□□ 0.22
Cd40P27512 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.45■□□□□ 0.22
Cd40P27512 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Cd40P27512 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.45■□□□□ 0.22
Cd40P27512 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cd40P27512 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cd40P27512 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.45■□□□□ 0.22
Cd40P27512 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.45■□□□□ 0.22
Cd40P27512 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cd40P27512 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Cd40P27512 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cd40P27512 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Cd40P27512 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.45■□□□□ 0.22
Cd40P27512 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Cd40P27512 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cd40P27512 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cd40P27512 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cd40P27512 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cd40P27512 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Cd40P27512 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.44■□□□□ 0.22
Cd40P27512 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cd40P27512 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cd40P27512 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cd40P27512 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Cd40P27512 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cd40P27512 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cd40P27512 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cd40P27512 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Cd40P27512 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.44■□□□□ 0.22
Cd40P27512 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cd40P27512 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cd40P27512 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Cd40P27512 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.44■□□□□ 0.22
Cd40P27512 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cd40P27512 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cd40P27512 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Cd40P27512 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cd40P27512 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.43■□□□□ 0.22
Cd40P27512 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cd40P27512 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.43■□□□□ 0.22
Cd40P27512 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cd40P27512 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cd40P27512 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cd40P27512 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cd40P27512 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cd40P27512 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cd40P27512 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cd40P27512 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.43■□□□□ 0.22
Cd40P27512 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.43■□□□□ 0.22
Cd40P27512 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cd40P27512 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.43■□□□□ 0.22
Cd40P27512 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cd40P27512 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cd40P27512 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Cd40P27512 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cd40P27512 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cd40P27512 Flg-201ENSMUST00000050758 1488 ntBASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms