Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pde6bP23440 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
Pde6bP23440 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Pde6bP23440 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pde6bP23440 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pde6bP23440 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pde6bP23440 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pde6bP23440 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.76■□□□□ 0.75
Pde6bP23440 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.76■□□□□ 0.75
Pde6bP23440 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pde6bP23440 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Pde6bP23440 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pde6bP23440 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pde6bP23440 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pde6bP23440 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pde6bP23440 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pde6bP23440 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pde6bP23440 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Pde6bP23440 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Pde6bP23440 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.75■□□□□ 0.75
Pde6bP23440 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pde6bP23440 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pde6bP23440 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Pde6bP23440 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pde6bP23440 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Pde6bP23440 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Pde6bP23440 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pde6bP23440 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.75■□□□□ 0.75
Pde6bP23440 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pde6bP23440 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Pde6bP23440 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Pde6bP23440 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.75■□□□□ 0.75
Pde6bP23440 Gm37055-201ENSMUST00000191866 133 ntBASIC19.75■□□□□ 0.75
Pde6bP23440 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pde6bP23440 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pde6bP23440 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pde6bP23440 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pde6bP23440 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.75■□□□□ 0.75
Pde6bP23440 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pde6bP23440 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Pde6bP23440 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.74■□□□□ 0.75
Pde6bP23440 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Pde6bP23440 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Pde6bP23440 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pde6bP23440 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Pde6bP23440 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.74■□□□□ 0.75
Pde6bP23440 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pde6bP23440 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Pde6bP23440 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pde6bP23440 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pde6bP23440 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pde6bP23440 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.73■□□□□ 0.75
Pde6bP23440 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pde6bP23440 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
Pde6bP23440 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pde6bP23440 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.73■□□□□ 0.75
Pde6bP23440 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pde6bP23440 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.73■□□□□ 0.75
Pde6bP23440 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pde6bP23440 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pde6bP23440 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pde6bP23440 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.73■□□□□ 0.75
Pde6bP23440 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pde6bP23440 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Pde6bP23440 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pde6bP23440 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pde6bP23440 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Pde6bP23440 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.72■□□□□ 0.75
Pde6bP23440 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pde6bP23440 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.72■□□□□ 0.75
Pde6bP23440 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pde6bP23440 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pde6bP23440 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pde6bP23440 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pde6bP23440 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Pde6bP23440 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pde6bP23440 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pde6bP23440 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pde6bP23440 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pde6bP23440 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pde6bP23440 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Pde6bP23440 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.71■□□□□ 0.75
Pde6bP23440 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pde6bP23440 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.71■□□□□ 0.75
Pde6bP23440 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pde6bP23440 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pde6bP23440 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pde6bP23440 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Pde6bP23440 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pde6bP23440 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pde6bP23440 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pde6bP23440 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pde6bP23440 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pde6bP23440 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Pde6bP23440 Gm15565-201ENSMUST00000118890 427 ntBASIC19.7■□□□□ 0.74
Pde6bP23440 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.7■□□□□ 0.74
Pde6bP23440 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pde6bP23440 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pde6bP23440 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pde6bP23440 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms